RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 PGFP49763 221 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 KIF11P52732 1056 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 IFRD2Q12894 506 aaPredicted RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 PABPC1LQ4VXU2 614 aaKnown RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 PRSS36Q5K4E3 855 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ZNF571Q7Z3V5 609 aaPredicted RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ZNF677Q86XU0 584 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 C1orf131Q8NDD1 294 aaKnown RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 AGPAT1Q99943 283 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 POMKQ9H5K3 350 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 CLUHO75153 1309 aa12.78□□□□□ -0.36
RHBDF1-211ENST00000493647 FAM92AA1XBS5 289 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 AKR1B15C9JRZ8 316 aaPredicted RBP12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 PIK3R2O00459 728 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 F11P03951 625 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 GJA1P17302 382 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 CEBPBP17676 345 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 NOMO3P69849 1222 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 KLHL30Q0D2K2 578 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 PDCLQ13371 301 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 ATAT1Q5SQI0 421 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 CES5AQ6NT32 575 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 KCTD13Q8WZ19 329 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 NDRG1Q92597 394 aaKnown RBP12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 CPXM1Q96SM3 734 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 NUCKS1Q9H1E3 243 aaKnown RBP12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 AVENQ9NQS1 362 aaPredicted RBP12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 ARHGAP20Q9P2F6 1191 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 USP3Q9Y6I4 520 aa12.77□□□□□ -0.37
RHBDF1-211ENST00000493647 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 RTN3O95197 1032 aaPredicted RBP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 SERPING1P05155 500 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 LCP1P13796 627 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 FSHRP23945 695 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 YWHAQP27348 245 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 GABRR2P28476 465 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 MTHFRP42898 656 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 KCNQ1P51787 676 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 TKTL1P51854 596 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 SLC8A3P57103 927 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 CYP4F8P98187 520 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 ADIGQ0VDE8 80 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 TAF10Q12962 218 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 TAF12Q16514 161 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 CLEC16AQ2KHT3 1053 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 PTPN20Q4JDL3 420 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 STXBP5Q5T5C0 1151 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 PDZD4Q76G19 769 aaPredicted RBP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 SCD5Q86SK9 330 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 FMNL3Q8IVF7 1028 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 ING5Q8WYH8 240 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 FBXO32Q969P5 355 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 HSFY1Q96LI6 401 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 ULBP1Q9BZM6 244 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 GMIPQ9P107 970 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
RHBDF1-211ENST00000493647 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 E5RJQ4 531 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 ERBB2P04626 1255 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 ZDHHC11BP0C7U3 371 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 CCDC172P0C7W6 258 aa12.75□□□□□ -0.37
RHBDF1-211ENST00000493647 UNGP13051 313 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms