RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CYFIP2Q96F07 1278 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 HINFPQ9BQA5 517 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 DMAP1Q9NPF5 467 aaPredicted RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 DNAJC12Q9UKB3 198 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
CTSA-209ENST00000493522 ASB3Q9Y575 518 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
CTSA-209ENST00000493522 SLC38A8A6NNN8 435 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 CACNA2D1P54289 1103 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 IFRD2Q12894 506 aaPredicted RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 GOLGA7BQ2TAP0 167 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 CYP4A22Q5TCH4 519 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 APTXQ7Z2E3 356 aaKnown RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 C1orf210Q8IVY1 113 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 LEMD2Q8NC56 503 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 SHDQ96IW2 340 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 GCNAQ96QF7 691 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 FAM207AQ9NSI2 230 aaPredicted RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 MRPS23Q9Y3D9 190 aaKnown RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 FHOD1Q9Y613 1164 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 R4GN57 208 aa12.27□□□□□ -0.45
CTSA-209ENST00000493522 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.45
CTSA-209ENST00000493522 PAEPP09466 180 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 SP9P0CG40 484 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 CSH1P0DML2 217 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 CSH2P0DML3 217 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 VDRP11473 427 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 CEBPBP17676 345 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 BRD2P25440 801 aaKnown RBP12.26□□□□□ -0.45
CTSA-209ENST00000493522 GABRR2P28476 465 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 ZNF132P52740 706 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 FANCCQ00597 558 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 PPP1R26Q5T8A7 1209 aaPredicted RBP12.26□□□□□ -0.45
CTSA-209ENST00000493522 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 ARHGAP17Q68EM7 881 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 PAQR9Q6ZVX9 377 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 MTSS1LQ765P7 747 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 TMC8Q8IU68 726 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 KIAA2013Q8IYS2 634 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 PJA1Q8NG27 643 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 ITFG1Q8TB96 612 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 SHC3Q92529 594 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 C8orf48Q96LL4 319 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 HNRNPABQ99729 332 aaKnown RBP12.26□□□□□ -0.45
CTSA-209ENST00000493522 GANQ9H2C0 597 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 ZNF334Q9HCZ1 680 aaPredicted RBP12.26□□□□□ -0.45
CTSA-209ENST00000493522 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 DLGAP2Q9P1A6 1054 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 CDH7Q9ULB5 785 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 SIK3Q9Y2K2 1263 aa12.26□□□□□ -0.45
CTSA-209ENST00000493522 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 A0A1W2PRU2 124 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 RNF225M0QZC1 329 aaPredicted RBP12.25□□□□□ -0.45
CTSA-209ENST00000493522 ZNF197O14709 1029 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 NOL4O94818 638 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 FGF19O95750 216 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 CALCAP01258 141 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
CTSA-209ENST00000493522 UCHL3P15374 230 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 GJA1P17302 382 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 CCR2P41597 374 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 EPHA5P54756 1037 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 MAP3K7CLP57077 242 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 STARD6P59095 220 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 PRSS36Q5K4E3 855 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 CLEC20AQ6ZU45 233 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 DENND5BQ6ZUT9 1274 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 SHKBP1Q8TBC3 707 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 RUBCNQ92622 972 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 FGF14Q92915 247 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 RMDN1Q96DB5 314 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 TCEAL4Q96EI5 215 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 SPATA17Q96L03 361 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 ERGIC2Q96RQ1 377 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 SMOQ99835 787 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 FOXQ1Q9C009 403 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 PLCB1Q9NQ66 1216 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
CTSA-209ENST00000493522 AVENQ9NQS1 362 aaPredicted RBP12.25□□□□□ -0.45
CTSA-209ENST00000493522 UXTQ9UBK9 157 aaPredicted RBP12.25□□□□□ -0.45
CTSA-209ENST00000493522 HESX1Q9UBX0 185 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 TSPAN16Q9UKR8 245 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
CTSA-209ENST00000493522 A0A1B0GTH6 734 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 LRRC10BA6NIK2 292 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 M0QYV0 167 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 O00370 1275 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 TEX33O43247 280 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 THAP12O43422 761 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 BEST1O76090 585 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms