RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FRMD3A2A2Y4 597 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 F8VP50 259 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 ADAM23O75077 832 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 KAT7O95251 611 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 OLFM2O95897 454 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 ABL1P00519 1130 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 WARSP23381 471 aaKnown RBP14.62□□□□□ -0.07
SAMM50-204ENST00000493161 KIR2DL1P43626 348 aaPredicted RBP14.62□□□□□ -0.07
SAMM50-204ENST00000493161 MAPK8P45983 427 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 MRPS21P82921 87 aaKnown RBP14.62□□□□□ -0.07
SAMM50-204ENST00000493161 KDSRQ06136 332 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 MYO1EQ12965 1108 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 TRIM61Q5EBN2 209 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 MDH1BQ5I0G3 518 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 DPH6Q7L8W6 267 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 C11orf74Q86VG3 221 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 GPD1LQ8N335 351 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 CCDC26Q8TAB7 109 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 HMGB4Q8WW32 186 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 HPS3Q969F9 1004 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 ANKRD36BP1Q96IX9 119 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 PNKPQ96T60 521 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 TTLL2Q9BWV7 592 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 PANK4Q9NVE7 773 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 CFAP97Q9P2B7 532 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 CCDC39Q9UFE4 941 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 CACNA1GO43497 2377 aa14.62□□□□□ -0.07
SAMM50-204ENST00000493161 TNRC6BQ9UPQ9 1833 aaKnown RBP14.62□□□□□ -0.07
SAMM50-204ENST00000493161 OAS1P00973 400 aaKnown RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 ANXA13P27216 316 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 HOXD13P35453 343 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 IFRD2Q12894 506 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 TAF10Q12962 218 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 LPCAT2Q7L5N7 544 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 DEFB119Q8N690 84 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 MYCBPAPQ8TBZ2 947 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 MMS19Q96T76 1030 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 DPEP3Q9H4B8 488 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 EVLQ9UI08 416 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 SRPRBQ9Y5M8 271 aaKnown RBP14.61□□□□□ -0.07
SAMM50-204ENST00000493161 IGF2RP11717 2491 aa14.61□□□□□ -0.07
SAMM50-204ENST00000493161 A0A0A0MRY4 1105 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 SPAARA0A1B0GVQ0 90 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 VPS37CA5D8V6 355 aaPredicted RBP14.6□□□□□ -0.07
SAMM50-204ENST00000493161 CLDN5O00501 218 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 TNFRSF10BO14763 440 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 MAP3K13O43283 966 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 HYAL3O43820 417 aaPredicted RBP14.6□□□□□ -0.07
SAMM50-204ENST00000493161 TNNC2P02585 160 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 ENGP17813 658 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 PFKLP17858 780 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 ITPKAP23677 461 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 PDE6CP51160 858 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 NOP14P78316 857 aaKnown RBP14.6□□□□□ -0.07
SAMM50-204ENST00000493161 RESTQ13127 1097 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 COL9A2Q14055 689 aaPredicted RBP14.6□□□□□ -0.07
SAMM50-204ENST00000493161 HS2ST1Q7LGA3 356 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 PHTF2Q8N3S3 785 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 WHAMMQ8TF30 809 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 WBP2Q969T9 261 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 C8orf48Q96LL4 319 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 ARHGEF4Q9NR80 690 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 BCCIPQ9P287 314 aaKnown RBP eCLIP14.6□□□□□ -0.07
SAMM50-204ENST00000493161 HCN2Q9UL51 889 aa14.6□□□□□ -0.07
SAMM50-204ENST00000493161 MYOFQ9NZM1 2061 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 TCRBV21S2A2A0A5A6 115 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ZNF233A6NK53 670 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 SRRM3A6NNA2 597 aaPredicted RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 TRIM66O15016 1216 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 TRIM24O15164 1050 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ALDH1A2O94788 518 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 APODP05090 189 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 MBL2P11226 248 aaPredicted RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ADH5P11766 374 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 GNL1P36915 607 aaPredicted RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 MAPRE1Q15691 268 aaKnown RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 DUOXA2Q1HG44 320 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 LY6G5CQ5SRR4 150 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 TRAPPC11Q7Z392 1133 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 SYT12Q8IV01 421 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 NAT16Q8N8M0 369 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ERLEC1Q96DZ1 483 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 ZFRQ96KR1 1074 aaKnown RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 CEP295NLQ96MC4 621 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 NUSAP1Q9BXS6 441 aaKnown RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 B3GNT5Q9BYG0 378 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 POLMQ9NP87 494 aaPredicted RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 KLK13Q9UKR3 277 aa14.59□□□□□ -0.07
SAMM50-204ENST00000493161 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
SAMM50-204ENST00000493161 SLC9A3R1O14745 358 aaPredicted RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 COCHO43405 550 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 PTPN1P18031 435 aaKnown RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 EIF2DP41214 584 aaKnown RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 STAT6P42226 847 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 GRIA2P42262 883 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms