RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 SMARCD1Q96GM5 515 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 B3GNT5Q9BYG0 378 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-205ENST00000492851 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 SEMA4GQ9NTN9 838 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 TRAF3IP3Q9Y228 551 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 F5P12259 2224 aa13.24□□□□□ -0.29
COL6A1-205ENST00000492851 FAM237AA0A1B0GTK4 181 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 OLFM2O95897 454 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 EIF2DP41214 584 aaKnown RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CASP4P49662 377 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 TUBP50607 506 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 ATXN1P54253 815 aaKnown RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 USP46P62068 366 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 LPAL2Q16609 132 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 NFIL3Q16649 462 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 ZACNQ401N2 412 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 SNX30Q5VWJ9 437 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 C11orf74Q86VG3 221 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 GRAMD1CQ8IYS0 662 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CRYBG2Q8N1P7 616 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CHFRQ96EP1 664 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 IMPG2Q9BZV3 1241 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 ZNF518BQ9C0D4 1074 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 RNF38Q9H0F5 515 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 DPEP3Q9H4B8 488 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 EBF1Q9UH73 591 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 CPQQ9Y646 472 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-205ENST00000492851 SPTBN4Q9H254 2564 aa13.23□□□□□ -0.29
COL6A1-205ENST00000492851 A0A1W2PQ27 194 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 A0A1W2PQ64 194 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 A0A1W2PQD8 194 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 AXIN1O15169 862 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 RHOBTB3O94955 611 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 APBB3O95704 486 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 KRT13P13646 458 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 CDH8P55286 799 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 HSF5Q4G112 596 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 HECTD3Q5T447 861 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 RPLP0P6Q8NHW5 317 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 DDX1Q92499 740 aaKnown RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 FBXO32Q969P5 355 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 ZC3H10Q96K80 434 aaKnown RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
COL6A1-205ENST00000492851 C2orf42Q9NWW7 574 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 IL37Q9NZH6 218 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 PCDHGA5Q9Y5G8 931 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 FRYLO94915 3013 aa13.22□□□□□ -0.29
COL6A1-205ENST00000492851 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 RHOBTB1O94844 696 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 ADH1CP00326 375 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 ASS1P00966 412 aaKnown RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 MBL2P11226 248 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 VAMP7P51809 220 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 MRPS21P82921 87 aaKnown RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 PRR23CQ6ZRP0 262 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 FAM35AQ86V20 835 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 TTC39CQ8N584 583 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 FAXDC2Q96IV6 333 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 PNKPQ96T60 521 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 CYP3A43Q9HB55 503 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 PARD6AQ9NPB6 346 aa13.21□□□□□ -0.29
COL6A1-205ENST00000492851 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-205ENST00000492851 A0A0A0MRY4 1105 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 CLDN5O00501 218 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 SLC30A4O14863 429 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 AP1G2O75843 785 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 ALDH1A2O94788 518 aa13.2□□□□□ -0.3
COL6A1-205ENST00000492851 VNN1O95497 513 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms