RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 RAB33AQ14088 237 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 DDR2Q16832 855 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 DCUN1D2Q6PH85 259 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 TTC9BQ8N6N2 239 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 C3orf20Q8ND61 904 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 ZNF564Q8TBZ8 553 aaPredicted RBP23.21■■□□□ 1.31
PSPC1-204ENST00000492741 RXFP1Q9HBX9 757 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 NGRNQ9NPE2 291 aaKnown RBP23.21■■□□□ 1.31
PSPC1-204ENST00000492741 AFF4Q9UHB7 1163 aaKnown RBP23.21■■□□□ 1.31
PSPC1-204ENST00000492741 PLXNA4Q9HCM2 1894 aa23.21■■□□□ 1.31
PSPC1-204ENST00000492741 ZNF500O60304 480 aaPredicted RBP23.2■■□□□ 1.3
PSPC1-204ENST00000492741 CNPP09543 421 aaKnown RBP23.2■■□□□ 1.3
PSPC1-204ENST00000492741 TKTL1P51854 596 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 MLLT1Q03111 559 aaPredicted RBP23.2■■□□□ 1.3
PSPC1-204ENST00000492741 MAMLD1Q13495 774 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 ZNF569Q5MCW4 686 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 FAM102AQ5T9C2 384 aaPredicted RBP23.2■■□□□ 1.3
PSPC1-204ENST00000492741 PLEKHA7Q6IQ23 1121 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 FAM183BPQ6ZVS7 135 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 ARNTL2Q8WYA1 636 aa23.2■■□□□ 1.3
PSPC1-204ENST00000492741 H3BNC9 293 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ADH1AP07327 375 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 KRT3P12035 628 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ATF2P15336 505 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 KLRC2P26717 231 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 RPL34P49207 117 aaKnown RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 GNG11P61952 73 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ZDHHC17Q8IUH5 632 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 MRPL43Q8N983 215 aaKnown RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ALS2CR12Q96Q35 445 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 CYP4F11Q9HBI6 524 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 PNPLA8Q9NP80 782 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 HHLA1C9JL84 531 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 GABBR2O75899 941 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 SOAT2O75908 522 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ABLIM3O94929 683 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 GJB6O95452 261 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 VNN2O95498 520 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 HAPLN1P10915 354 aaPredicted RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 TUFMP49411 452 aaKnown RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 GPR15P49685 360 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 RNASE9P60153 205 aaKnown RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 RPL10AP62906 217 aaKnown RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 IFRD2Q12894 506 aaPredicted RBP23.19■■□□□ 1.3
PSPC1-204ENST00000492741 SDHAF4Q5VUM1 108 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 FEZF2Q8TBJ5 459 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 MCRS1Q96EZ8 462 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 C8orf48Q96LL4 319 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 CRISPLD1Q9H336 500 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 ANAPC7Q9UJX3 599 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 COG5Q9UP83 839 aa23.19■■□□□ 1.3
PSPC1-204ENST00000492741 PAPSS1O43252 624 aaPredicted RBP23.18■■□□□ 1.3
PSPC1-204ENST00000492741 GSCP56915 257 aaPredicted RBP23.18■■□□□ 1.3
PSPC1-204ENST00000492741 SLC6A3Q01959 620 aa23.18■■□□□ 1.3
PSPC1-204ENST00000492741 GPRIN1Q7Z2K8 1008 aa23.18■■□□□ 1.3
PSPC1-204ENST00000492741 CALR3Q96L12 384 aaKnown RBP23.18■■□□□ 1.3
PSPC1-204ENST00000492741 MCEEQ96PE7 176 aa23.18■■□□□ 1.3
PSPC1-204ENST00000492741 KLHL5Q96PQ7 755 aa23.18■■□□□ 1.3
PSPC1-204ENST00000492741 METTL5Q9NRN9 209 aaKnown RBP23.18■■□□□ 1.3
PSPC1-204ENST00000492741 IRAK3Q9Y616 596 aa23.18■■□□□ 1.3
PSPC1-204ENST00000492741 TNRC18O15417 2968 aaPredicted RBP23.18■■□□□ 1.3
PSPC1-204ENST00000492741 C2orf71A6NGG8 1288 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 SIGLEC16A6NMB1 481 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 HIDE1A8MVS5 230 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 PRRG1O14668 218 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 TCEAL1Q15170 157 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 RAB41Q5JT25 222 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 TRIM58Q8NG06 486 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 TPCN2Q8NHX9 752 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 CLEC4CQ8WTT0 213 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 TIFAQ96CG3 184 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 ULBP1Q9BZM6 244 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 PCDHGC5Q9Y5F6 944 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 CAPN6Q9Y6Q1 641 aa23.17■■□□□ 1.3
PSPC1-204ENST00000492741 MYO1FO00160 1098 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 GRAP2O75791 330 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 FBXO21O94952 628 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SLC5A3P53794 718 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 PDE12Q6L8Q7 609 aaKnown RBP23.16■■□□□ 1.3
PSPC1-204ENST00000492741 OLFML1Q6UWY5 402 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 NYAP1Q6ZVC0 841 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 DAAM2Q86T65 1068 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 NUP93Q8N1F7 819 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 GPR152Q8TDT2 470 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 BTBD6Q96KE9 485 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 CNGB3Q9NQW8 809 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 TMEM110-MUSTN1A8MSY1 372 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 PALMO75781 387 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SEC24AO95486 1093 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 ZBED1O96006 694 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 USP17L7P0C7H9 530 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SPATA31D3P0C874 917 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 IRS1P35568 1242 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 ALDH1A3P47895 512 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 RPL7AP62424 266 aaKnown RBP23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SMAD3P84022 425 aaKnown RBP23.16■■□□□ 1.3
PSPC1-204ENST00000492741 MESDQ14696 234 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SPATA31D4Q6ZUB0 917 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SLC35F6Q8N357 371 aa23.16■■□□□ 1.3
PSPC1-204ENST00000492741 SCAMP5Q8TAC9 235 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms