RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 GTF2BQ00403 316 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 PKP1Q13835 747 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CRY1Q16526 586 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 KIAA1211LQ6NV74 962 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CCDC91Q7Z6B0 441 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 PIP4P1Q86T03 277 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 MYCT1Q8N699 235 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 FRMD1Q8N878 549 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
HDAC3-213ENST00000492506 SH3RF2Q8TEC5 729 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 PIGKQ92643 395 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 FNBP1Q96RU3 617 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 TRPC7Q9HCX4 862 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 ABCB6Q9NP58 842 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
HDAC3-213ENST00000492506 KLK13Q9UKR3 277 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 MMP17Q9ULZ9 603 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 LHX6Q9UPM6 363 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 MSRB2Q9Y3D2 182 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 PLXNB3Q9ULL4 1909 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 C2orf78A6NCI8 922 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 TAF4O00268 1085 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 NRDCO43847 1150 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 P2RY2P41231 377 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 PTGER3P43115 390 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 SEC13P55735 322 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 WNT7BP56706 349 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
HDAC3-213ENST00000492506 TSPY1Q01534 308 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 POU5F1Q01860 360 aaKnown RBP14.04□□□□□ -0.16
HDAC3-213ENST00000492506 MESP2Q0VG99 397 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 SV2CQ496J9 727 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 TRIM61Q5EBN2 209 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
HDAC3-213ENST00000492506 ADALQ6DHV7 355 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 GPBP1Q86WP2 473 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 SFTPA1Q8IWL2 248 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 CCDC33Q8N5R6 958 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 TTC16Q8NEE8 873 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 CCDC26Q8TAB7 109 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 FAM107BQ9H098 131 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 IKZF4Q9H2S9 585 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 DEF6Q9H4E7 631 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 BLOC1S4Q9NUP1 217 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 MBD1Q9UIS9 605 aaPredicted RBP14.04□□□□□ -0.16
HDAC3-213ENST00000492506 L1RE1Q9UN81 338 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 ARHGAP26Q9UNA1 814 aa14.04□□□□□ -0.16
HDAC3-213ENST00000492506 SPAARA0A1B0GVQ0 90 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 FAM221BA6H8Z2 402 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 TNFRSF10BO14763 440 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 ACAT1P24752 427 aaKnown RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 LMAN2Q12907 356 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 NR1H3Q13133 447 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 SEMA3BQ13214 749 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 PEAR1Q5VY43 1037 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 C17orf53Q8N3J3 647 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 RLN3Q8WXF3 142 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 DDX43Q9NXZ2 648 aaKnown RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 GTF3C4Q9UKN8 822 aa14.03□□□□□ -0.16
HDAC3-213ENST00000492506 AGO2Q9UKV8 859 aaKnown RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 SETXQ7Z333 2677 aaKnown RBP14.03□□□□□ -0.16
HDAC3-213ENST00000492506 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 UPK3BL1B0FP48 263 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 UPK3BL2E5RIL1 263 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 HCRTO43612 131 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 FAM13AO94988 1023 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 NFATC1O95644 943 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 ENGP17813 658 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 HDCP19113 662 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 ADSSP30520 456 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 MAPK8P45983 427 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 MRPS21P82921 87 aaKnown RBP14.02□□□□□ -0.17
HDAC3-213ENST00000492506 MAP7D1Q3KQU3 841 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 CFAP221Q4G0U5 840 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 SLFN12LQ6IEE8 588 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 SLC23A3Q6PIS1 610 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 OSTM1Q86WC4 334 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 NT5DC4Q86YG4 428 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 SYT12Q8IV01 421 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 TMEFF1Q8IYR6 380 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 IL17RCQ8NAC3 791 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 CDK5RAP3Q96JB5 506 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 ST6GALNAC4Q9H4F1 302 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 PILRBQ9UKJ0 227 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 PTPRBP23467 1997 aa14.02□□□□□ -0.17
HDAC3-213ENST00000492506 A0A0A0MRY4 1105 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 SGK1O00141 431 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 MYO1CO00159 1063 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 GABRDO14764 452 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 CYP17A1P05093 508 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms