RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 TCRBV9S1A1TA0A576 114 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 IQCF3P0C7M6 154 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 GPD2P43304 727 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC8A3P57103 927 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 KCNJ11Q14654 390 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 NOMO1Q15155 1222 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SEPT7Q16181 437 aaKnown RBP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SH3PXD2AQ5TCZ1 1133 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 PLPPR4Q7Z2D5 763 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 MTDHQ86UE4 582 aaKnown RBP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 NCAPG2Q86XI2 1143 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 RFWD2Q8NHY2 731 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 ZBTB10Q96DT7 871 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 MANSC1Q9H8J5 431 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 ZFP69BQ9UJL9 534 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 TNFSF13BQ9Y275 285 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 TEX264Q9Y6I9 313 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 EVPLQ92817 2033 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 SOCS7O14512 581 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 DHRS4L1P0CG22 281 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 GM2AP17900 193 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 PCK1P35558 622 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 ROR1Q01973 937 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 OVGP1Q12889 678 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 RAB6CQ53S08 254 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 TRNP1Q6NT89 227 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 SH2D5Q6ZV89 423 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 CLNKQ7Z7G1 428 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 LONP2Q86WA8 852 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 EXOC8Q8IYI6 725 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 TMEM176AQ96HP8 235 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 SERAC1Q96JX3 654 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 RAB6CQ9H0N0 254 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 GGA3Q9NZ52 723 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 LACTBL1A8MY62 500 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 M0QYV0 167 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 GPR25O00155 361 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 PEX11AO75192 247 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 MT-ND3P03897 115 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 ITGB3P05106 788 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 TROVE2P10155 538 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 EPHB2P29323 1055 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 STIP1P31948 543 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 RASSF2P50749 326 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 NEK3P51956 506 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF143P52747 638 aaPredicted RBP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 PTK7Q13308 1070 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 DARS2Q6PI48 645 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 DHX37Q8IY37 1157 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC44A1Q8WWI5 657 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 ADPGKQ9BRR6 497 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 TLE6Q9H808 572 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 SAR1AQ9NR31 198 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 ASNSD1Q9NWL6 643 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 DCTN4Q9UJW0 460 aa16.84■□□□□ 0.29
SEMA4D-220ENST00000492386 KBTBD13C9JR72 458 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ETV4P43268 484 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 CRYMQ14894 314 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 KBTBD12Q3ZCT8 623 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ANKRD20A2Q5SQ80 823 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM102AQ5T9C2 384 aaPredicted RBP16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ANKRD20A1Q5TYW2 823 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ANKRD20A3Q5VUR7 823 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 JADE1Q6IE81 842 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ZC3H18Q86VM9 953 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 MIEF2Q96C03 454 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 RNPEPL1Q9HAU8 725 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 LNPEPQ9UIQ6 1025 aa16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 POLR2AP24928 1970 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-220ENST00000492386 IQANK1A0A1B0GTG1 560 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 NOP56O00567 594 aaKnown RBP16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 LPXNO60711 386 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 GNAZP19086 355 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CDH6P55285 790 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 SLC18A2Q05940 514 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 FAAP100Q0VG06 881 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM182AQ5T1J6 154 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 LRRC6Q86X45 466 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CHSY1Q86X52 802 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 APOPT1Q96IL0 206 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 FGD4Q96M96 766 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 ASCC2Q9H1I8 757 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 AVILO75366 819 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 HMGCRP04035 888 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 GPD1P21695 349 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 PTPN4P29074 926 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CLCN3P51790 818 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CBLBQ13191 982 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms