RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CENPUQ71F23 418 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 PYROXD1Q8WU10 500 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 SLC10A4Q96EP9 437 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CCDC77Q9BR77 488 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 LHX5Q9H2C1 402 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CCDC134Q9H6E4 229 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 ASB14A6NK59 587 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 A8MUI8 341 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 BTBD19C9JJ37 291 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 H7C0C1 242 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 GABBR2O75899 941 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 RASSF9O75901 435 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 FAM155BO75949 473 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 HMGCRP04035 888 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 MCF2P10911 925 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 KRT4P19013 534 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 ATP5DP30049 168 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 ATP5OP48047 213 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 LMNB2Q03252 620 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 CYB5D1Q6P9G0 228 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 DPP9Q86TI2 863 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 MCRS1Q96EZ8 462 aa13.02□□□□□ -0.32
HMGN1-220ENST00000492280 NSRP1Q9H0G5 558 aaKnown RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 BARX2Q9UMQ3 279 aaPredicted RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.32
HMGN1-220ENST00000492280 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 FAM47DPA6NHR8 397 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 MCF2LO15068 1137 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
HMGN1-220ENST00000492280 GPD1P21695 349 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 SNAPC2Q13487 334 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-220ENST00000492280 FASTKD5Q7L8L6 764 aaKnown RBP13.02□□□□□ -0.33
HMGN1-220ENST00000492280 SPATA21Q7Z572 469 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 CCDC63Q8NA47 563 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 FAM172AQ8WUF8 416 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 PAFAH2Q99487 392 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 TMPRSS4Q9NRS4 437 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 COX16Q9P0S2 106 aa13.02□□□□□ -0.33
HMGN1-220ENST00000492280 CCL15-CCL14A0A0B4J2E2 113 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 SLC26A2P50443 739 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
HMGN1-220ENST00000492280 COPS2P61201 443 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 TAP1Q03518 808 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 LAMC2Q13753 1193 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 HIC1Q14526 733 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 KRT81Q14533 505 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 E2F5Q15329 346 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 CCL15Q16663 113 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 OR6B3Q8NGW1 331 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 NT5C1AQ9BXI3 368 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 SHOC2Q9UQ13 582 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
HMGN1-220ENST00000492280 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
HMGN1-220ENST00000492280 APOC4-APOC2K7ER74 178 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 APOC2P02655 101 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 LCP1P13796 627 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 ADRA1DP25100 572 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 LMO2P25791 158 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 ELK3P41970 407 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 OVGP1Q12889 678 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 CCDC14Q49A88 953 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 ZNF484Q5JVG2 852 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 CATSPER4Q7RTX7 472 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 FAM228AQ86W67 206 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 PPIL6Q8IXY8 311 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 PPTC7Q8NI37 304 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-220ENST00000492280 TMEM40Q8WWA1 233 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 CFAP36Q96G28 342 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
HMGN1-220ENST00000492280 KBTBD13C9JR72 458 aa13□□□□□ -0.33
HMGN1-220ENST00000492280 ALOX15BO15296 676 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms