RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 FMO5P49326 533 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 KPNA1P52294 538 aaPredicted RBP26.16■■□□□ 1.78
UPF3A-209ENST00000492270 MAP3K7CLP57077 242 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 USP4Q13107 963 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF77Q15935 545 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 WDR44Q5JSH3 913 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 FOXR2Q6PJQ5 311 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 TXNDC11Q6PKC3 985 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 FBXO32Q969P5 355 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 FAM83CQ9BQN1 747 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 HPS4Q9NQG7 708 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 CISHQ9NSE2 258 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 MRPS17Q9Y2R5 130 aaKnown RBP26.16■■□□□ 1.78
UPF3A-209ENST00000492270 MYO15AQ9UKN7 3530 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 RTN3O95197 1032 aaPredicted RBP26.15■■□□□ 1.78
UPF3A-209ENST00000492270 HDCP19113 662 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 YWHAQP27348 245 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 PLCB2Q00722 1185 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 CLDN23Q96B33 292 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 CYFIP2Q96F07 1278 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 SLITRK1Q96PX8 696 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 NELL2Q99435 816 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 HNRNPABQ99729 332 aaKnown RBP26.15■■□□□ 1.78
UPF3A-209ENST00000492270 CSNK1G1Q9HCP0 422 aa26.15■■□□□ 1.78
UPF3A-209ENST00000492270 SPECC1L-ADORA2AF8WAN1 911 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 FAM200BP0CF97 657 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 CTHP32929 405 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 ZXDBP98169 803 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 LRMPQ12912 555 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 MTF1Q14872 753 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 CLEC17AQ6ZS10 378 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 CLEC20AQ6ZU45 233 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 GPRIN1Q7Z2K8 1008 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 SH3RF2Q8TEC5 729 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 JAKMIP2Q96AA8 810 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 FAXDC2Q96IV6 333 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 RNF38Q9H0F5 515 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 IRF2BPLQ9H1B7 796 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 CLSTN2Q9H4D0 955 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 EBF3Q9H4W6 596 aa26.14■■□□□ 1.78
UPF3A-209ENST00000492270 VPS13AQ96RL7 3174 aa26.14■■□□□ 1.77
UPF3A-209ENST00000492270 OTOL1A6NHN0 477 aaPredicted RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 OAS1P00973 400 aaKnown RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 ARSAP15289 507 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 TRIM21P19474 475 aaKnown RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 PPP3CCP48454 512 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 MLLT6P55198 1093 aaPredicted RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 PPP1R26Q5T8A7 1209 aaPredicted RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 ALYREFQ86V81 257 aaKnown RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 C1orf210Q8IVY1 113 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 SLC4A11Q8NBS3 891 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 SRRTQ9BXP5 876 aaKnown RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 C8orf33Q9H7E9 229 aaPredicted RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 IL37Q9NZH6 218 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 CHORDC1Q9UHD1 332 aaPredicted RBP26.13■■□□□ 1.77
UPF3A-209ENST00000492270 ARHGAP26Q9UNA1 814 aa26.13■■□□□ 1.77
UPF3A-209ENST00000492270 DMDP11532 3685 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 OLFM2O95897 454 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 HOXD11P31277 338 aaPredicted RBP26.12■■□□□ 1.77
UPF3A-209ENST00000492270 RAD23BP54727 409 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 CUL2Q13617 745 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 ITPRIPL2Q3MIP1 535 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 CC2D1AQ6P1N0 951 aaPredicted RBP26.12■■□□□ 1.77
UPF3A-209ENST00000492270 MED15Q96RN5 788 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 SPATA6Q9NWH7 488 aaPredicted RBP26.12■■□□□ 1.77
UPF3A-209ENST00000492270 GMIPQ9P107 970 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 WNT6Q9Y6F9 365 aa26.12■■□□□ 1.77
UPF3A-209ENST00000492270 HHLA1C9JL84 531 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 NCAM2O15394 837 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 RPS9P46781 194 aaKnown RBP26.11■■□□□ 1.77
UPF3A-209ENST00000492270 PGFP49763 221 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 MRE11P49959 708 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 RUNX3Q13761 415 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 RALGPS2Q86X27 583 aaPredicted RBP26.11■■□□□ 1.77
UPF3A-209ENST00000492270 TRIM59Q8IWR1 403 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 MAML2Q8IZL2 1156 aaPredicted RBP26.11■■□□□ 1.77
UPF3A-209ENST00000492270 PDZD8Q8NEN9 1154 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 OVCA2Q8WZ82 227 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 CHFRQ96EP1 664 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 MSANTD3Q96H12 275 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 TMEM176AQ96HP8 235 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 HEXIM2Q96MH2 286 aaKnown RBP26.11■■□□□ 1.77
UPF3A-209ENST00000492270 LMBRD1Q9NUN5 540 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 SMPD4Q9NXE4 827 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 CPQQ9Y646 472 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 ATG2BQ96BY7 2078 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 MYOFQ9NZM1 2061 aa26.11■■□□□ 1.77
UPF3A-209ENST00000492270 KIAA1549LQ6ZVL6 1849 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 USP34Q70CQ2 3546 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 FAM92AA1XBS5 289 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 PFKLP17858 780 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 MAGEA9P43362 315 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 PDE6CP51160 858 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 SLC7A9P82251 487 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 PON2Q15165 354 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 TTC39CQ8N584 583 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 LMAN1LQ9HAT1 526 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 RBM12Q9NTZ6 932 aaKnown RBP26.1■■□□□ 1.77
UPF3A-209ENST00000492270 RWDD2AQ9UIY3 292 aa26.1■■□□□ 1.77
UPF3A-209ENST00000492270 LEFTY2O00292 366 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms