RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LPCAT2Q7L5N7 544 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 OR2I1PQ8NGU4 316 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 DNAJC19Q96DA6 116 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 SYT15Q9BQS2 421 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 MTMR12Q9C0I1 747 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 TBC1D7Q9P0N9 293 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 HELZ2Q9BYK8 2649 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 GOLGA4Q13439 2230 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 MYMKA6NI61 221 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 UPK3BL1B0FP48 263 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 UPK3BL2E5RIL1 263 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 OAS1P00973 400 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 ABCD1P33897 745 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 LHX1P48742 406 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 SIM1P81133 766 aaPredicted RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 KDSRQ06136 332 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 LMAN2Q12907 356 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 POSTNQ15063 836 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 DEFB119Q8N690 84 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 OR5B17Q8NGF7 314 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 HMGB4Q8WW32 186 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 ZFRQ96KR1 1074 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 PNKPQ96T60 521 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 NUSAP1Q9BXS6 441 aaKnown RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 CAPN10Q9HC96 672 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 SMPD4Q9NXE4 827 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 RBAKQ9NYW8 714 aaPredicted RBP14.14□□□□□ -0.15
USF1-206ENST00000491629 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 CPQQ9Y646 472 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 CABIN1Q9Y6J0 2220 aa14.14□□□□□ -0.15
USF1-206ENST00000491629 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
USF1-206ENST00000491629 KRT19P08727 400 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 CD59P13987 128 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 GJB2P29033 226 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 PCSK1P29120 753 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 LONP1P36776 959 aaKnown RBP14.13□□□□□ -0.15
USF1-206ENST00000491629 VSTM1Q6UX27 236 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 DENND5BQ6ZUT9 1274 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 MIB1Q86YT6 1006 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 CHCHD4Q8N4Q1 142 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 WHAMMQ8TF30 809 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 CACTINQ8WUQ7 758 aaKnown RBP14.13□□□□□ -0.15
USF1-206ENST00000491629 WBP2Q969T9 261 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 PCED1BQ96HM7 432 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 CD248Q9HCU0 757 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 TRPM5Q9NZQ8 1165 aa14.13□□□□□ -0.15
USF1-206ENST00000491629 MAGEC2Q9UBF1 373 aaPredicted RBP14.13□□□□□ -0.15
USF1-206ENST00000491629 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
USF1-206ENST00000491629 TMEM131Q92545 1883 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 TCRBV21S2A2A0A5A6 115 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 F8VP50 259 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 TULP1O00294 542 aaPredicted RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 TRIM24O15164 1050 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 MAP3K13O43283 966 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 ALDH1A2O94788 518 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 PDGFRBP09619 1106 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 PFKLP17858 780 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 GABRG2P18507 467 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 GARTP22102 1010 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 GRIK1P39086 918 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 EIF2DP41214 584 aaKnown RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 NOP14P78316 857 aaKnown RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 RBP5P82980 135 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 RESTQ13127 1097 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 SPDYCQ5MJ68 293 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 LYSMD4Q5XG99 296 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 C4orf50Q6ZRC1 276 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 RAB44Q7Z6P3 723 aaPredicted RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 ETFBKMTQ8IXQ9 262 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 KIAA1958Q8N8K9 716 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 ACCSQ96QU6 501 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 SLC32A1Q9H598 525 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 MRPL44Q9H9J2 332 aaKnown RBP14.12□□□□□ -0.15
USF1-206ENST00000491629 ARHGEF4Q9NR80 690 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 INTS13Q9NVM9 706 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 CFAP97Q9P2B7 532 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 ASXL3Q9C0F0 2248 aa14.12□□□□□ -0.15
USF1-206ENST00000491629 NUMA1Q14980 2115 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 GJB3O75712 270 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 APODP05090 189 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 CFIP05156 583 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 WARSP23381 471 aaKnown RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 GRIA2P42262 883 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 TNFRSF4P43489 277 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 CYP27A1Q02318 531 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 TAF10Q12962 218 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 SF3A1Q15459 793 aaKnown RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 LY6G5CQ5SRR4 150 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms