RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 KCNV2Q8TDN2 545 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 MYLPFQ96A32 169 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 OTUB2Q96DC9 234 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 INTS4Q96HW7 963 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 ANKRD36BP1Q96IX9 119 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM121BQ9BXQ6 578 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 RNF38Q9H0F5 515 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 KIAA1586Q9HCI6 787 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM9BQ9NQ34 198 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 PTPRJQ12913 1337 aa9.02□□□□□ -0.97
APOBEC3F-204ENST00000491387 TNRC6BQ9UPQ9 1833 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM8BA6NDV4 472 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PRPF6O94906 941 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 TNNC2P02585 160 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 KRT19P08727 400 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 BCKDHBP21953 392 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 BDNFP23560 247 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 GBP1P32455 592 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 HOXD12P35452 270 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 HOXD13P35453 343 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 GRIK1P39086 918 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 TNFRSF4P43489 277 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 KIR2DL1P43626 348 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PSMD2Q13200 908 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 SLC39A14Q15043 492 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 DHCR24Q15392 516 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 E2F4Q16254 413 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 C2orf27AQ580R0 203 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 SNX30Q5VWJ9 437 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PEAR1Q5VY43 1037 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 CNNM4Q6P4Q7 775 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 RHBDF2Q6PJF5 856 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 STXBP4Q6ZWJ1 553 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 DDX42Q86XP3 938 aaKnown RBP eCLIP9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 GRAMD1CQ8IYS0 662 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PHTF2Q8N3S3 785 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 IL17RCQ8NAC3 791 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 OVCA2Q8WZ82 227 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PCED1BQ96HM7 432 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PNKPQ96T60 521 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PCIF1Q9H4Z3 704 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 PANK4Q9NVE7 773 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 IL37Q9NZH6 218 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 TBC1D14Q9P2M4 693 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
APOBEC3F-204ENST00000491387 E2F8A0AVK6 867 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 FAM92AA1XBS5 289 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 F8VP50 259 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 GIPC1O14908 333 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 EIF3DO15371 548 aaKnown RBP eCLIP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ALDH1A2O94788 518 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 KAT7O95251 611 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 F13A1P00488 732 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 IDEP14735 1019 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 HNRNPLP14866 589 aaKnown RBP eCLIP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 KCNA4P22459 653 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ANXA13P27216 316 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 GNL1P36915 607 aaPredicted RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 STAT6P42226 847 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 GRIA2P42262 883 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TUBP50607 506 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 PSMC1P62191 440 aaKnown RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 SNRPFP62306 86 aaKnown RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 IRX4P78413 519 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZNF252P-AS1Q0IIN9 211 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 MESP2Q0VG99 397 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 LMAN2Q12907 356 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 BYSLQ13895 437 aaKnown RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 STK38Q15208 465 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 MAP7D1Q3KQU3 841 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ANO7Q6IWH7 933 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 SLC23A3Q6PIS1 610 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 UNQ6494/PRO21346Q6UXR6 183 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 LPCAT2Q7L5N7 544 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 EPM2AIP1Q7L775 607 aaPredicted RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TRAPPC11Q7Z392 1133 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 FILIP1Q7Z7B0 1213 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 CBWD2Q8IUF1 395 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 SYT12Q8IV01 421 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ETFBKMTQ8IXQ9 262 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 WHAMMQ8TF30 809 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 NOC3LQ8WTT2 800 aaKnown RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 SNX21Q969T3 373 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 DHX58Q96C10 678 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 FNBP1Q96RU3 617 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TPSD1Q9BZJ3 242 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 LRRC27Q9C0I9 530 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 ELOVL4Q9GZR5 314 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 BLZF1Q9H2G9 400 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 VRTNQ9H8Y1 702 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM30AQ9NV96 361 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 KBTBD4Q9NVX7 518 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 HSPBP1Q9NZL4 362 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms