RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 SMOQ99835 787 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 ARID3AQ99856 593 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 TTLL2Q9BWV7 592 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 NT5C1AQ9BXI3 368 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 CLSTN2Q9H4D0 955 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 LTB4R2Q9NPC1 389 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRPV5Q9NQA5 729 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 GTSE1Q9NYZ3 720 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRPM5Q9NZQ8 1165 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
SOX2-OT-212ENST00000491282 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZNF840PA6NDX5 716 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 MAP3K7O43318 606 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 CILPO75339 1184 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 BEST1O76090 585 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 CKMP06732 381 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 HDCP19113 662 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 KPNA1P52294 538 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 INCA1Q0VD86 236 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 PAK1Q13153 545 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 ARHGAP29Q52LW3 1261 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRIML1Q8N9V2 468 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZMIZ2Q8NF64 920 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 SCAMP5Q8TAC9 235 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 FAM3CQ92520 227 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 CYFIP2Q96F07 1278 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 THG1LQ9NWX6 298 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 EHD2Q9NZN4 543 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 GCNT4Q9P109 453 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 CHORDC1Q9UHD1 332 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
SOX2-OT-212ENST00000491282 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 MAN2B1O00754 1011 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 YWHAQP27348 245 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 FMO5P49326 533 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 FZD5Q13467 585 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 ANGPT1Q15389 498 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 HEXIM2Q96MH2 286 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 NELL2Q99435 816 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 FAM83CQ9BQN1 747 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 RNF38Q9H0F5 515 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 EBF3Q9H4W6 596 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 CISHQ9NSE2 258 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 SMPD4Q9NXE4 827 aa12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 MRPS17Q9Y2R5 130 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-212ENST00000491282 OTOL1A6NHN0 477 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 RTN3O95197 1032 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 ARSAP15289 507 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 PGFP49763 221 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SLC5A3P53794 718 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 RAD23BP54727 409 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 MTF1Q14872 753 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 ITPRIPL2Q3MIP1 535 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 CLEC20AQ6ZU45 233 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SH3RF2Q8TEC5 729 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 FBXO32Q969P5 355 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 MED15Q96RN5 788 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 GMIPQ9P107 970 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
SOX2-OT-212ENST00000491282 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
SOX2-OT-212ENST00000491282 CTHP32929 405 aa12.1□□□□□ -0.47
SOX2-OT-212ENST00000491282 PPP3CCP48454 512 aa12.1□□□□□ -0.47
SOX2-OT-212ENST00000491282 ZXDBP98169 803 aa12.1□□□□□ -0.47
SOX2-OT-212ENST00000491282 CUL2Q13617 745 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms