RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 TCF3P15923 654 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 PXNP49023 591 aaPredicted RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 AP3M2P53677 418 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 MYL6P60660 151 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 USP46P62068 366 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 IFRD2Q12894 506 aaPredicted RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 ZNF699Q32M78 642 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 EML3Q32P44 896 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 PKN3Q6P5Z2 889 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 PRR23CQ6ZRP0 262 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 CACNA2D4Q7Z3S7 1137 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 FAM160A2Q8N612 972 aaPredicted RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 B3GALNT2Q8NCR0 500 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 RPLP0P6Q8NHW5 317 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 GAB3Q8WWW8 586 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 CHFRQ96EP1 664 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.98□□□□□ -0.49
DUBR-204ENST00000490441 PTPRDP23468 1912 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
DUBR-204ENST00000490441 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.97□□□□□ -0.49
DUBR-204ENST00000490441 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 LEFTY2O00292 366 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 SLC9A3R1O14745 358 aaPredicted RBP11.97□□□□□ -0.49
DUBR-204ENST00000490441 AXIN1O15169 862 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 DNM1Q05193 864 aaKnown RBP11.97□□□□□ -0.49
DUBR-204ENST00000490441 CSRP2Q16527 193 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 ZNF667Q5HYK9 610 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 GRAMD1CQ8IYS0 662 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 HHIPQ96QV1 700 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 MED10Q9BTT4 135 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 DPEP3Q9H4B8 488 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 FBRSL1Q9HCM7 1045 aaKnown RBP11.97□□□□□ -0.49
DUBR-204ENST00000490441 SERTAD1Q9UHV2 236 aa11.97□□□□□ -0.49
DUBR-204ENST00000490441 DCDC2BA2VCK2 349 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 AKAP3O75969 853 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 RTN3O95197 1032 aaPredicted RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 APBB3O95704 486 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 MBL2P11226 248 aaPredicted RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 P4HA1P13674 534 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 CASP4P49662 377 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 SLC7A9P82251 487 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 TAF10Q12962 218 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 NCOA4Q13772 614 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 AASDHQ4L235 1098 aaPredicted RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 SCARA5Q6ZMJ2 495 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 SYT13Q7L8C5 426 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 DDX42Q86XP3 938 aaKnown RBP eCLIP11.96□□□□□ -0.49
DUBR-204ENST00000490441 NUP93Q8N1F7 819 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 KIAA1958Q8N8K9 716 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 C12orf50Q8NA57 414 aaPredicted RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 PDZD8Q8NEN9 1154 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 FBXO32Q969P5 355 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 CCDC47Q96A33 483 aaKnown RBP11.96□□□□□ -0.49
DUBR-204ENST00000490441 LOXL4Q96JB6 756 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 TNIP3Q96KP6 325 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 XYLT2Q9H1B5 865 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 LINC00597Q9H2U6 94 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 SMYD3Q9H7B4 428 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 SMPD4Q9NXE4 827 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 USP25Q9UHP3 1055 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 NME7Q9Y5B8 376 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 CPQQ9Y646 472 aa11.96□□□□□ -0.49
DUBR-204ENST00000490441 ACACBO00763 2458 aa11.96□□□□□ -0.5
DUBR-204ENST00000490441 HELZP42694 1942 aaKnown RBP11.96□□□□□ -0.5
DUBR-204ENST00000490441 LRRIQ3A6PVS8 624 aaPredicted RBP11.95□□□□□ -0.5
DUBR-204ENST00000490441 CLDN5O00501 218 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 SLC30A4O14863 429 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 ACTN4O43707 911 aaKnown RBP11.95□□□□□ -0.5
DUBR-204ENST00000490441 KIF20AO95235 890 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 MYL1P05976 194 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 YWHAQP27348 245 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 HOXC13P31276 330 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 STK4Q13043 487 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 PKP1Q13835 747 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 DMC1Q14565 340 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 ELF2Q15723 593 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 FILIP1Q7Z7B0 1213 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 FAM35AQ86V20 835 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 KBTBD6Q86V97 674 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 KIAA0895Q8NCT3 520 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 TSTD1Q8NFU3 115 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 PARD3BQ8TEW8 1205 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 SMARCD1Q96GM5 515 aa11.95□□□□□ -0.5
DUBR-204ENST00000490441 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms