RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ADPGKQ9BRR6 497 aa7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 HSFX1Q9UBD0 423 aa7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 FNDC3AQ9Y2H6 1198 aaKnown RBP7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 NUB1Q9Y5A7 615 aa7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 WNT6Q9Y6F9 365 aa7.75□□□□□ -1.17
PDLIM1-203ENST00000490391 MYOFQ9NZM1 2061 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 IGHV1OR15-9A0A0B4J2B8 117 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 RRP8O43159 456 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 PRPF3O43395 683 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 KLF8O95600 359 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 F11P03951 625 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 KCNE1P15382 129 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 MCM4P33991 863 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 KIR2DL1P43626 348 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 RARRES1P49788 294 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 RCAN1P53805 252 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 NLRP12P59046 1061 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 CXADRP78310 365 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 BNC1Q01954 994 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 RHDQ02161 417 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 SEMG2Q02383 582 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 YWHAHQ04917 246 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 NT5DC1Q5TFE4 455 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TXNDC8Q6A555 127 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 B4GALNT3Q6L9W6 998 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 CC2D1AQ6P1N0 951 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 SLC36A4Q6YBV0 504 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 ZBTB8OSQ8IWT0 167 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 EFCAB13Q8IY85 973 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TMEM130Q8N3G9 435 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TRIML1Q8N9V2 468 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TTC9Q92623 222 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 HAS1Q92839 578 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 ZNF419Q96HQ0 510 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 CDC6Q99741 560 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 ZDHHC5Q9C0B5 715 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 ANKEF1Q9NU02 776 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 SLC38A7Q9NVC3 462 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 DUS2Q9NX74 493 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 NOP53Q9NZM5 478 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 VPS54Q9P1Q0 977 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 BCCIPQ9P287 314 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 IL17BQ9UHF5 180 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 DDX25Q9UHL0 483 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 BTBD3Q9Y2F9 522 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TIMM13Q9Y5L4 95 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 ICE1Q9Y2F5 2266 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 MYLKQ15746 1914 aa7.74□□□□□ -1.17
PDLIM1-203ENST00000490391 TCRBV21S2A2A0A5A6 115 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 OR6C75A6NL08 312 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 SLC27A2O14975 620 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 FLRT2O43155 660 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 CILPO75339 1184 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 TADA3O75528 432 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 HMGA1P17096 107 aaKnown RBP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 GABRG2P18507 467 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 AMPD1P23109 780 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 DDX6P26196 483 aaKnown RBP eCLIP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 AARSP49588 968 aaKnown RBP eCLIP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 EXOSC10Q01780 885 aaKnown RBP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 NUCB1Q02818 461 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 POU4F2Q12837 409 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 MYBPC2Q14324 1141 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 RTP5Q14D33 572 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 NPY5RQ15761 445 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 HSF5Q4G112 596 aaPredicted RBP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 EMC10Q5UCC4 262 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 DHRS13Q6UX07 377 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 MON1AQ86VX9 555 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 TMPRSS12Q86WS5 348 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 CCDC148Q8NFR7 591 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 RUFY2Q8WXA3 655 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 FAM20AQ96MK3 541 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 TCEANC2Q96MN5 208 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 SLC22A12Q96S37 553 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 HSD17B14Q9BPX1 270 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 SLKQ9H2G2 1235 aaPredicted RBP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 LINC00597Q9H2U6 94 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 FAM124BQ9H5Z6 455 aaPredicted RBP7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 CD248Q9HCU0 757 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 ZDHHC4Q9NPG8 344 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 TM7SF3Q9NS93 570 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 CALCOCO1Q9P1Z2 691 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 CNTN3Q9P232 1028 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 ANKMY1Q9P2S6 941 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 FKBPLQ9UIM3 349 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 PCDHGB2Q9Y5G2 931 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 ANAPC1Q9H1A4 1944 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 OTOGQ6ZRI0 2925 aa7.73□□□□□ -1.17
PDLIM1-203ENST00000490391 A0A0A0MRY4 1105 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 KLF18A0A0U1RQI7 1052 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 USO1O60763 962 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms