RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CHRNB1P11230 501 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 CD58P19256 250 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 SLC5A3P53794 718 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 NR1H3Q13133 447 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 FZD5Q13467 585 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 PON2Q15165 354 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 ISM2Q6H9L7 571 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 FUKQ8N0W3 1084 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 ZNF687Q8N1G0 1237 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 OSCP1Q8WVF1 389 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 ATRIPQ8WXE1 791 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 KCNK16Q96T55 309 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 APOBEC3GQ9HC16 384 aaKnown RBP18.5■□□□□ 0.55
SEC13-218ENST00000490283 METTL14Q9HCE5 456 aaKnown RBP18.5■□□□□ 0.55
SEC13-218ENST00000490283 HPS4Q9NQG7 708 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 RAB20Q9NX57 234 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 HMGXB4Q9UGU5 601 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 ARMCX3Q9UH62 379 aaPredicted RBP18.5■□□□□ 0.55
SEC13-218ENST00000490283 MAN1B1Q9UKM7 699 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 PCDHGA2Q9Y5H1 932 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 COL4A2P08572 1712 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 F5P12259 2224 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 LMNAP02545 664 aaKnown RBP18.49■□□□□ 0.55
SEC13-218ENST00000490283 TCF3P15923 654 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 ADORA2BP29275 332 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 NRLP54845 237 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 GRSF1Q12849 480 aaKnown RBP eCLIP18.49■□□□□ 0.55
SEC13-218ENST00000490283 TXNDC11Q6PKC3 985 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 DDX42Q86XP3 938 aaKnown RBP eCLIP18.49■□□□□ 0.55
SEC13-218ENST00000490283 MAML2Q8IZL2 1156 aaPredicted RBP18.49■□□□□ 0.55
SEC13-218ENST00000490283 SYNPOQ8N3V7 929 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 FAM126AQ9BYI3 521 aaPredicted RBP18.49■□□□□ 0.55
SEC13-218ENST00000490283 FBXO44Q9H4M3 255 aa18.49■□□□□ 0.55
SEC13-218ENST00000490283 PRMT8Q9NR22 394 aaPredicted RBP18.49■□□□□ 0.55
SEC13-218ENST00000490283 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 TRIM49BA6NDI0 452 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 CILPO75339 1184 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 NFATC1O95644 943 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 MBL2P11226 248 aaPredicted RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 ARSAP15289 507 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 ANP32AP39687 249 aaKnown RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 CXCL12P48061 93 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 MCCD1P59942 119 aaPredicted RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 SLC7A9P82251 487 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 MAMSTRQ6ZN01 415 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 PAQR9Q6ZVX9 377 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 ZC3H3Q8IXZ2 948 aaKnown RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 SPEM1Q8N4L4 309 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 C12orf29Q8N999 325 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 CYFIP2Q96F07 1278 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 CEP63Q96MT8 703 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 NACA2Q9H009 215 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 FAM124BQ9H5Z6 455 aaPredicted RBP18.48■□□□□ 0.55
SEC13-218ENST00000490283 ECT2Q9H8V3 914 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 ZSCAN32Q9NX65 697 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 CPQQ9Y646 472 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 WNT6Q9Y6F9 365 aa18.48■□□□□ 0.55
SEC13-218ENST00000490283 LEFTY2O00292 366 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 SLC9A3R1O14745 358 aaPredicted RBP18.47■□□□□ 0.55
SEC13-218ENST00000490283 GADD45BO75293 160 aaPredicted RBP18.47■□□□□ 0.55
SEC13-218ENST00000490283 OAS1P00973 400 aaKnown RBP18.47■□□□□ 0.55
SEC13-218ENST00000490283 UBE2HP62256 183 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 HECTD3Q5T447 861 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 KIAA1958Q8N8K9 716 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 SCAMP5Q8TAC9 235 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 RIN3Q8TB24 985 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 SMOQ99835 787 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 CSNK1G1Q9HCP0 422 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 RBM12Q9NTZ6 932 aaKnown RBP18.47■□□□□ 0.55
SEC13-218ENST00000490283 SMPD4Q9NXE4 827 aa18.47■□□□□ 0.55
SEC13-218ENST00000490283 BIN1O00499 593 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 TNFRSF10BO14763 440 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 OLFM2O95897 454 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 TUBP50607 506 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.55
SEC13-218ENST00000490283 CETN1Q12798 172 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 ZNF394Q53GI3 561 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 TSSK4Q6SA08 328 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 FILIP1Q7Z7B0 1213 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 NELFBQ8WX92 580 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 SEMA4DQ92854 862 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 JAKMIP2Q96AA8 810 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 HEXIM2Q96MH2 286 aaKnown RBP18.46■□□□□ 0.55
SEC13-218ENST00000490283 TWNKQ96RR1 684 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 P2RY13Q9BPV8 354 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 HINFPQ9BQA5 517 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 TLR8Q9NR97 1041 aaKnown RBP18.46■□□□□ 0.55
SEC13-218ENST00000490283 CISHQ9NSE2 258 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 CHORDC1Q9UHD1 332 aaPredicted RBP18.46■□□□□ 0.55
SEC13-218ENST00000490283 PTPRDP23468 1912 aa18.46■□□□□ 0.55
SEC13-218ENST00000490283 OBSL1O75147 1896 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms