RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 USP46P62068 366 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 ZP2Q05996 745 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 TEAD2Q15562 447 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 FIGNQ5HY92 759 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 SARM1Q6SZW1 724 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 GAREM2Q75VX8 874 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 SCAMP5Q8TAC9 235 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 OVCA2Q8WZ82 227 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 MRPS31Q92665 395 aaKnown RBP11.48□□□□□ -0.57
VPS13D-210ENST00000489961 FGF13Q92913 245 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 FBXO32Q969P5 355 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 MYADMQ96S97 322 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 PDCL3Q9H2J4 239 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 SLITRK6Q9H5Y7 841 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 LRRC4Q9HBW1 653 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 GDE1Q9NZC3 331 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 ZMYM5Q9UJ78 669 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 MYO6Q9UM54 1294 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 CEP83Q9Y592 693 aa11.48□□□□□ -0.57
VPS13D-210ENST00000489961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.48□□□□□ -0.575e-7■□□□□ 10.7
VPS13D-210ENST00000489961 ITIH6Q6UXX5 1313 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 SOBPA7XYQ1 873 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 C2CD4DB7Z1M9 353 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 HHLA1C9JL84 531 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 MOSPD3O75425 235 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 LAMP2P13473 410 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 CYP11B1P15538 503 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 FERP16591 822 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 DDX6P26196 483 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS13D-210ENST00000489961 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
VPS13D-210ENST00000489961 CYP4F8P98187 520 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 TAF10Q12962 218 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 DENND1BQ6P3S1 775 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 ZNF677Q86XU0 584 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 ZDHHC14Q8IZN3 488 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
VPS13D-210ENST00000489961 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 KCTD13Q8WZ19 329 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 SECISBP2LQ93073 1101 aaKnown RBP11.47□□□□□ -0.57
VPS13D-210ENST00000489961 MCRS1Q96EZ8 462 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 TRIM5Q9C035 493 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 IL37Q9NZH6 218 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 PCDHGC3Q9UN70 934 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 COL6A3P12111 3177 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 DOCK8Q8NF50 2099 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 ANAPC1Q9H1A4 1944 aa11.47□□□□□ -0.57
VPS13D-210ENST00000489961 NCANO14594 1321 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 A0A1W2PQJ5 194 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 FAM92AA1XBS5 289 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TULP2O00295 520 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 ABL1P00519 1130 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TPM1P09493 284 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 GPD2P43304 727 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 ACADSBP45954 432 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 RGS7P49802 495 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TKTL1P51854 596 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 KIF11P52732 1056 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 ARID5AQ03989 594 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TRIM14Q14142 442 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 MTSS1LQ765P7 747 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TMEM150AQ86TG1 271 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 NOP9Q86U38 636 aaKnown RBP11.46□□□□□ -0.57
VPS13D-210ENST00000489961 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 EPS8L1Q8TE68 723 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 STK32AQ8WU08 396 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 SLC35F5Q8WV83 523 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 BAP1Q92560 729 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 HSFY1Q96LI6 401 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 NOX5Q96PH1 765 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TTYH3Q9C0H2 523 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 NUCKS1Q9H1E3 243 aaKnown RBP11.46□□□□□ -0.57
VPS13D-210ENST00000489961 LHX5Q9H2C1 402 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TASP1Q9H6P5 420 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 TLR8Q9NR97 1041 aaKnown RBP11.46□□□□□ -0.57
VPS13D-210ENST00000489961 SCML2Q9UQR0 700 aa11.46□□□□□ -0.57
VPS13D-210ENST00000489961 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.58
VPS13D-210ENST00000489961 PRUNE2Q8WUY3 3088 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 TRAV19A0A0A6YYK7 116 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 ZNF840PA6NDX5 716 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 LRRC53A6NM62 1247 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-210ENST00000489961 TADA3O75528 432 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 CFHP08603 1231 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 LCP1P13796 627 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 PFKLP17858 780 aa11.45□□□□□ -0.58
VPS13D-210ENST00000489961 PSEN1P49768 467 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms