RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
PLOD3-216ENST00000489927 MESP2Q0VG99 397 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 TAF10Q12962 218 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 DHCR24Q15392 516 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 CRY1Q16526 586 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 TMEM92Q6UXU6 159 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
PLOD3-216ENST00000489927 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 OR6B3Q8NGW1 331 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 AGPAT3Q9NRZ7 376 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 CFAP97Q9P2B7 532 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 PTPRDP23468 1912 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 SLC9A3R1O14745 358 aaPredicted RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 GIPC1O14908 333 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 KHNYNO15037 678 aaKnown RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 PTPN1P18031 435 aaKnown RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 NOVA1P51513 510 aaKnown RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 MRPS21P82921 87 aaKnown RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 IFRD2Q12894 506 aaPredicted RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 STK38Q15208 465 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 RHBDF2Q6PJF5 856 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 C12orf40Q86WS4 652 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 TTC30AQ86WT1 665 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 FNBP1Q96RU3 617 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 PNKPQ96T60 521 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
PLOD3-216ENST00000489927 CEP295Q9C0D2 2601 aa16.9■□□□□ 0.3
PLOD3-216ENST00000489927 CLDN5O00501 218 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CLIC2O15247 247 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 KAT7O95251 611 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
PLOD3-216ENST00000489927 TIE1P35590 1138 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CYP2J2P51589 502 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 TNNC1P63316 161 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 ASIC1P78348 528 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CYP24A1Q07973 514 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 PSMD6Q15008 389 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 IL17RCQ8NAC3 791 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 TXNDC5Q8NBS9 432 aaKnown RBP16.89■□□□□ 0.29
PLOD3-216ENST00000489927 LINC00301Q8NCQ3 95 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 B3GALNT2Q8NCR0 500 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 OLIG1Q8TAK6 271 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 B3GNT5Q9BYG0 378 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
PLOD3-216ENST00000489927 CUEDC2Q9H467 287 aa16.89■□□□□ 0.29
PLOD3-216ENST00000489927 A8MXQ7 604 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 SGK1O00141 431 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 FAM163BP0C2L3 166 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 MBL2P11226 248 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 MYL6P60660 151 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 AMPD3Q01432 767 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 NELFCDQ8IXH7 590 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 NUP93Q8N1F7 819 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 ZNF516Q92618 1163 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 DHX58Q96C10 678 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 ZDHHC4Q9NPG8 344 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 TMEM9BQ9NQ34 198 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
PLOD3-216ENST00000489927 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
PLOD3-216ENST00000489927 CHD6Q8TD26 2715 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 A0A0A0MRY4 1105 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 SPTLC2O15270 562 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 STX6O43752 255 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 STAU1O95793 577 aaKnown RBP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ADH1CP00326 375 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 APODP05090 189 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ADH5P11766 374 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 YWHAQP27348 245 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 KIR2DL1P43626 348 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 IRX4P78413 519 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 KDSRQ06136 332 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 TRPC3Q13507 836 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 SH3PXD2AQ5TCZ1 1133 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms