RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ZDHHC17Q8IUH5 632 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 SCML4Q8N228 414 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 TXLNBQ8N3L3 684 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 EFHBQ8N7U6 833 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 SLC7A14Q8TBB6 771 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 CPA5Q8WXQ8 436 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 PPP1R13BQ96KQ4 1090 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 FBXO44Q9H4M3 255 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 ST7Q9NRC1 585 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 SPTLC3Q9NUV7 552 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 ZDHHC7Q9NXF8 308 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 MTCH2Q9Y6C9 303 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 TULP2O00295 520 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 SART1O43290 800 aaKnown RBP14.63□□□□□ -0.07
C9orf3-221ENST00000489562 FTLP02792 175 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-221ENST00000489562 MYBL1P10243 752 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 EPCAMP16422 314 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 ATF6P18850 670 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 GABRB2P47870 512 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 RGS7P49802 495 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 CDR1P51861 262 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 SLC5A3P53794 718 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 GSCP56915 257 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-221ENST00000489562 TWF1Q12792 350 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 KCNC3Q14003 757 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 DDR2Q16832 855 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 TMEM184AQ6ZMB5 413 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 DENND5BQ6ZUT9 1274 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 MON1BQ7L1V2 547 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 NUP93Q8N1F7 819 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 SIX6OS1Q8N1H7 587 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 ELMOD1Q8N336 334 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 C18orf8Q96DM3 657 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 CPXM1Q96SM3 734 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 CNGB3Q9NQW8 809 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 ADAM22Q9P0K1 906 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 WDR35Q9P2L0 1181 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 CYTH4Q9UIA0 394 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 INTUQ9ULD6 942 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 OBSL1O75147 1896 aa14.63□□□□□ -0.07
C9orf3-221ENST00000489562 ANKRD62A6NC57 917 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 TMCO5BA8MYB1 307 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 E5RJQ4 531 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 XYLBO75191 536 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SOAT2O75908 522 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 H2AFZP0C0S5 128 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SPATA31D3P0C874 917 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SCNN1AP37088 669 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 TKTL1P51854 596 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 ADIGQ0VDE8 80 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 HYAL1Q12794 435 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 ZNF268Q14587 947 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-221ENST00000489562 MTF1Q14872 753 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 HS1BP3Q53T59 392 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 MMS22LQ6ZRQ5 1243 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SPATA31D4Q6ZUB0 917 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 H2AFVQ71UI9 128 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 MCOLN2Q8IZK6 566 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 PSMG2Q969U7 264 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 TRMT2BQ96GJ1 504 aaKnown RBP14.62□□□□□ -0.07
C9orf3-221ENST00000489562 C11orf70Q9BRQ4 267 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SFXN1Q9H9B4 322 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 TAS2R14Q9NYV8 317 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 UXTQ9UBK9 157 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-221ENST00000489562 USP3Q9Y6I4 520 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
C9orf3-221ENST00000489562 SLC38A8A6NNN8 435 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 PAPLNO95428 1278 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 IGFBP4P22692 258 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 YWHAQP27348 245 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 MAGEA1P43355 309 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 GPR15P49685 360 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 ADGRE1Q14246 886 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 TAF12Q16514 161 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 TOGARAM2Q6ZUX3 1019 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 CMASQ8NFW8 434 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-221ENST00000489562 CTNNBL1Q8WYA6 563 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-221ENST00000489562 OVCA2Q8WZ82 227 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 IRGQQ8WZA9 623 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 MYRFLQ96LU7 910 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 ZNF512Q96ME7 567 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-221ENST00000489562 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 SLITRK1Q96PX8 696 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 TRIM62Q9BVG3 475 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 TTLL2Q9BWV7 592 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 KCNF1Q9H3M0 494 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 IL37Q9NZH6 218 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 C2orf16Q68DN1 1984 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 NCANO14594 1321 aa14.61□□□□□ -0.07
C9orf3-221ENST00000489562 DOCK6Q96HP0 2047 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 FAM92AA1XBS5 289 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 ZNF263O14978 683 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 FGF19O95750 216 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 ZBED1O96006 694 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 ERBB2P04626 1255 aa14.6□□□□□ -0.07
C9orf3-221ENST00000489562 CCDC175P0C221 793 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms