RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 BMT2Q1RMZ1 405 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 GAB4Q2WGN9 574 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 KIAA1958Q8N8K9 716 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 ZNF518BQ9C0D4 1074 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 DUSP15Q9H1R2 295 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-231ENST00000488905 SMOC1Q9H4F8 434 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 CPQQ9Y646 472 aa19.62■□□□□ 0.73
HDAC6-231ENST00000488905 TNRC6BQ9UPQ9 1833 aaKnown RBP19.62■□□□□ 0.73
HDAC6-231ENST00000488905 A8MXQ7 604 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 DCLK1O15075 740 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 POLR2DO15514 142 aaKnown RBP19.61■□□□□ 0.73
HDAC6-231ENST00000488905 SEC13P55735 322 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 MYL6P60660 151 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 TAF10Q12962 218 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 TRPC3Q13507 836 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 FILIP1Q7Z7B0 1213 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 C12orf56Q8IXR9 622 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 TSTD1Q8NFU3 115 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 USP33Q8TEY7 942 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 SLITRK1Q96PX8 696 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 RNF38Q9H0F5 515 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 XYLT2Q9H1B5 865 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 BLZF1Q9H2G9 400 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 VPS45Q9NRW7 570 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 SMPD4Q9NXE4 827 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 CGNQ9P2M7 1197 aaKnown RBP19.61■□□□□ 0.73
HDAC6-231ENST00000488905 NXF1Q9UBU9 619 aaKnown RBP19.61■□□□□ 0.73
HDAC6-231ENST00000488905 ZFHX4Q86UP3 3567 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 FRYQ5TBA9 3013 aa19.61■□□□□ 0.73
HDAC6-231ENST00000488905 CFAP47Q6ZTR5 3102 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 CEP295Q9C0D2 2601 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 K7EQS6 105 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 ABL1P00519 1130 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 ATICP31939 592 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 DGKEP52429 567 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 IFRD2Q12894 506 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-231ENST00000488905 STPG1Q5TH74 334 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 TDRD10Q5VZ19 366 aaKnown RBP19.6■□□□□ 0.73
HDAC6-231ENST00000488905 ZNF516Q92618 1163 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 SYAP1Q96A49 352 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-231ENST00000488905 B3GNT5Q9BYG0 378 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 BACH2Q9BYV9 841 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 SLC39A2Q9NP94 309 aa19.6■□□□□ 0.73
HDAC6-231ENST00000488905 CLDN5O00501 218 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 SLC9A3R1O14745 358 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-231ENST00000488905 RHOBTB1O94844 696 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 PI4KAP42356 2102 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 C2orf27AQ580R0 203 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 FOXD4L5Q5VV16 416 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-231ENST00000488905 TCEAL6Q6IPX3 200 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 DDX42Q86XP3 938 aaKnown RBP eCLIP19.59■□□□□ 0.73
HDAC6-231ENST00000488905 FOXD4L4Q8WXT5 416 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-231ENST00000488905 TCEAL3Q969E4 200 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 TPSD1Q9BZJ3 242 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 CFAP97Q9P2B7 532 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 MMP17Q9ULZ9 603 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 CEP192Q8TEP8 1941 aa19.59■□□□□ 0.73
HDAC6-231ENST00000488905 ATP8B3O60423 1300 aa19.58■□□□□ 0.73
HDAC6-231ENST00000488905 PVALEFA0A1B0GWK0 134 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 SCAMP3O14828 347 aaKnown RBP19.58■□□□□ 0.72
HDAC6-231ENST00000488905 TM4SF5O14894 197 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 EXOC3O60645 756 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 RTN3O95197 1032 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-231ENST00000488905 MBL2P11226 248 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-231ENST00000488905 GBP1P32455 592 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 CASP4P49662 377 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 CREB5Q02930 508 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 CUL4BQ13620 913 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 DHCR24Q15392 516 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 KNOP1Q1ED39 458 aaKnown RBP19.58■□□□□ 0.72
HDAC6-231ENST00000488905 ZNF699Q32M78 642 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 FAM35AQ86V20 835 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 RASSF3Q86WH2 238 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 PDZD8Q8NEN9 1154 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 PLEKHO2Q8TD55 490 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 FBXO32Q969P5 355 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 CNOT6LQ96LI5 555 aaKnown RBP19.58■□□□□ 0.72
HDAC6-231ENST00000488905 VRTNQ9H8Y1 702 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 FAM13BQ9NYF5 915 aa19.58■□□□□ 0.72
HDAC6-231ENST00000488905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-231ENST00000488905 BCLAF3A2AJT9 711 aaKnown RBP19.57■□□□□ 0.72
HDAC6-231ENST00000488905 ANTXRLA6NF34 631 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 PHACTR2O75167 634 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 CLSTN1O94985 981 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 ADH1CP00326 375 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 YWHAQP27348 245 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 EIF2DP41214 584 aaKnown RBP19.57■□□□□ 0.72
HDAC6-231ENST00000488905 AFMP43652 599 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 BIRC3Q13489 604 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-231ENST00000488905 RESP18Q5W5W9 173 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 PMS2CLQ68D20 193 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 ANO7Q6IWH7 933 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-231ENST00000488905 SCARA5Q6ZMJ2 495 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 C11orf74Q86VG3 221 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms