RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 MARCKSL1P49006 195 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 SLC8A3P57103 927 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 CUL2Q13617 745 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 DHX34Q14147 1143 aaKnown RBP13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ZNF667Q5HYK9 610 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 GLB1LQ6UWU2 654 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 PRELID2Q8N945 189 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 CTNNBL1Q8WYA6 563 aaPredicted RBP13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ZNF570Q96NI8 536 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 PCDHB7Q9Y5E2 793 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 RALGAPA2Q2PPJ7 1873 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 FOXO6A8MYZ6 492 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 CREB1P16220 341 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 CLCNKBP51801 687 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 DRG2P55039 364 aaKnown RBP13.98□□□□□ -0.17
CHD1L-208ENST00000488864 GCNT1Q02742 428 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ADCY2Q08462 1091 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 IKBKEQ14164 716 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ZNF394Q53GI3 561 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 TNFAIP8L3Q5GJ75 292 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 FAM117BQ6P1L5 589 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 OTOP2Q7RTS6 562 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 EXOC3L1Q86VI1 746 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 KRT35Q92764 455 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 ABHD8Q96I13 439 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 SMYD3Q9H7B4 428 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 TMEM161AQ9NX61 479 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 HCSTQ9UBK5 93 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 LRFN2Q9ULH4 789 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 PCDHA3Q9Y5H8 950 aa13.98□□□□□ -0.17
CHD1L-208ENST00000488864 TTC3P53804 2025 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 CYP26A1O43174 497 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 RIPK2O43353 540 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 XPOTO43592 962 aaKnown RBP13.97□□□□□ -0.17
CHD1L-208ENST00000488864 B4GALT3O60512 393 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 ALADP13716 330 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 ASPAP45381 313 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 GALNTL6Q49A17 601 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 TMEM199Q8N511 208 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 HASPINQ8TF76 798 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 BADQ92934 168 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 FGFR1OP2Q9NVK5 253 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 ZMYND8Q9ULU4 1186 aaPredicted RBP13.97□□□□□ -0.17
CHD1L-208ENST00000488864 SNX9Q9Y5X1 595 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 CDH23Q9H251 3354 aa13.97□□□□□ -0.17
CHD1L-208ENST00000488864 TCP11X1B4DZS4 312 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 F8W810 466 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 RASGRF2O14827 1237 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SPTLC1O15269 473 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 DIAPH2O60879 1101 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 PHF2O75151 1096 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 KRT16P08779 473 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 RFX1P22670 979 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 PPP2R5EQ16537 467 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 TMEM270Q6UE05 265 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 BZW1Q7L1Q6 419 aaKnown RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 ZNF280BQ86YH2 543 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SHC3Q92529 594 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 NAP1L3Q99457 506 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SEPT11Q9NVA2 429 aaKnown RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 ALG6Q9Y672 507 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 TCRBV7S2A1N4TA0A589 114 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 PIRO00625 290 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 ORC1Q13415 861 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 TMEM109Q9BVC6 243 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 NSRP1Q9H0G5 558 aaKnown RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SDCBP2Q9H190 292 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 UBN1Q9NPG3 1134 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 CHORDC1Q9UHD1 332 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 TRIM33Q9UPN9 1127 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 USP15Q9Y4E8 981 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-208ENST00000488864 PCDHB4Q9Y5E5 795 aa13.96□□□□□ -0.17
CHD1L-208ENST00000488864 PDCD11Q14690 1871 aaKnown RBP13.95□□□□□ -0.18
CHD1L-208ENST00000488864 DDHD2O94830 711 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-208ENST00000488864 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
CHD1L-208ENST00000488864 CCHCR1Q8TD31 782 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 CYP3A5P20815 502 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms