RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 ANP32DO95626 131 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TXNP10599 105 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 RABGGTBP53611 331 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 YWHAGP61981 247 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TAP1Q03518 808 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CELF3Q5SZQ8 465 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 DARS2Q6PI48 645 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 NAT8LQ8N9F0 302 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 LRRC8CQ8TDW0 803 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 FAM167AQ96KS9 214 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 ADPGKQ9BRR6 497 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 RPF1Q9H9Y2 349 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MCM8Q9UJA3 840 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 LTBP3Q9NS15 1303 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 SCN1AP35498 2009 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 A0A0G2JND7 137 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC195A0A1B0GUA6 201 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TYROBPO43914 113 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 LGR5O75473 907 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CYP2C8P10632 490 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 EPHB2P29323 1055 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MSH2P43246 934 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 BMPR2Q13873 1038 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 R3HDM1Q15032 1099 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TAF1BQ53T94 588 aaPredicted RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 PPP6R3Q5H9R7 873 aaPredicted RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 FAM183BPQ6ZVS7 135 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MTDHQ86UE4 582 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CXorf38Q8TB03 319 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 NSMCE1Q8WV22 266 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 NDRG1Q92597 394 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF75CPQ92670 426 aaPredicted RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TTC17Q96AE7 1141 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MAF1Q9H063 256 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 IFT122Q9HBG6 1241 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
CLIC4-202ENST00000488683 STRIP2Q9ULQ0 834 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 CXorf49A8MYA2 514 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 H7C0C1 242 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 PRPF4O43172 522 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 ATP5OP48047 213 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 NDST1P52848 882 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 IRX4P78413 519 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 SPARCL1Q14515 664 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 WLSQ5T9L3 541 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 UNC5BQ8IZJ1 945 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 FAM111AQ96PZ2 611 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 LHX5Q9H2C1 402 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 FBXO6Q9NRD1 293 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 E2F8A0AVK6 867 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 T-ENOLP0DO92 83 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 INSRRP14616 1297 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 GM2AP17900 193 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 GRIA1P42261 906 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 GEMIN4P57678 1058 aaKnown RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 SURF1Q15526 300 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 TAZQ16635 292 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 RNF43Q68DV7 783 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 CDHR3Q6ZTQ4 885 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 TTC8Q8TAM2 541 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 TMPRSS4Q9NRS4 437 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 KANSL3Q9P2N6 904 aa13.25□□□□□ -0.29
CLIC4-202ENST00000488683 PSMC3IPQ9P2W1 217 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-202ENST00000488683 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 TRUB2O95900 331 aaKnown RBP13.24□□□□□ -0.29
CLIC4-202ENST00000488683 HMGCRP04035 888 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 MOGSQ13724 837 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 CEP128Q6ZU80 1094 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 CYP4V2Q6ZWL3 525 aaPredicted RBP13.24□□□□□ -0.29
CLIC4-202ENST00000488683 ASRGL1Q7L266 308 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 TTC7BQ86TV6 843 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 ACOT1Q86TX2 421 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 PPIL6Q8IXY8 311 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC110Q8TBZ0 833 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 DCAKDQ8WVC6 231 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 C2orf40Q9H1Z8 148 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms