RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 KRT31Q15323 416 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 TTC30AQ86WT1 665 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 RBBP8NLQ8NC74 664 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 FBXO32Q969P5 355 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 SLC22A12Q96S37 553 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 ZSWIM1Q9BR11 485 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 DUSP16Q9BY84 665 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 HSD3B7Q9H2F3 369 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 TRPC7Q9HCX4 862 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 UBE2TQ9NPD8 197 aaPredicted RBP16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 TRPM5Q9NZQ8 1165 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 APEX2Q9UBZ4 518 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 CNTN6Q9UQ52 1028 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 ZDBF2Q9HCK1 2354 aa16.93■□□□□ 0.3
ERGIC3-216ENST00000488384 HELZP42694 1942 aaKnown RBP16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 COL4A3Q01955 1670 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 SYCE3A1L190 88 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 ZNF840PA6NDX5 716 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 O00370 1275 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 PDGFBP01127 241 aaPredicted RBP16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 ZNF18P17022 549 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 GOLGA7BQ2TAP0 167 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 DPY19L2P1Q6NXN4 242 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 DEPDC1BQ8WUY9 529 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 E2F7Q96AV8 911 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 LRRC3BQ96PB8 259 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 SLITRK1Q96PX8 696 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 BPIFA3Q9BQP9 254 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 COMMD8Q9NX08 183 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 OBP2AQ9NY56 170 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 AJAP1Q9UKB5 411 aaPredicted RBP16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 TSPAN16Q9UKR8 245 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 CCL26Q9Y258 94 aa16.92■□□□□ 0.3
ERGIC3-216ENST00000488384 CALCAP01258 141 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 VDRP11473 427 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 PSMC3P17980 439 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 AVPR1AP37288 418 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 MFSD6LQ8IWD5 586 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 RIN3Q8TB24 985 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 USP13Q92995 863 aaPredicted RBP16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 TRMT61BQ9BVS5 477 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 NAT10Q9H0A0 1025 aaKnown RBP16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 GMIPQ9P107 970 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 WNT16Q9UBV4 365 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 FBXL21Q9UKT6 434 aa16.91■□□□□ 0.3
ERGIC3-216ENST00000488384 TRAV19A0A0A6YYK7 116 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 KRBA1A5PL33 1030 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 BECN2A8MW95 431 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 PES1O00541 588 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 OLFM2O95897 454 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 OAS1P00973 400 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 CKMP06732 381 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 ZDHHC11BP0C7U3 371 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 KRT5P13647 590 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 PPP3CCP48454 512 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 BCAT1P54687 386 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 MFAP3P55082 362 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 IER5LQ5T953 404 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 DHX40Q8IX18 779 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 SIX5Q8N196 739 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 CELF5Q8N6W0 485 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 ARL14EPQ8N8R7 260 aaPredicted RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 SHC3Q92529 594 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 FAM81BQ96LP2 452 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 CYP2S1Q96SQ9 504 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 VPS16Q9H269 839 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 FBXO44Q9H4M3 255 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 ARHGEF3Q9NR81 526 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 CA14Q9ULX7 337 aa16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.3
ERGIC3-216ENST00000488384 TULP2O00295 520 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 ARNTLO00327 626 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 DPYSL4O14531 572 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 CYP26A1O43174 497 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 LETM1O95202 739 aaPredicted RBP16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 USP17L7P0C7H9 530 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 PFKLP17858 780 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 GDI1P31150 447 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 PGFP49763 221 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 KIF11P52732 1056 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 PFKPQ01813 784 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 PDE4CQ08493 712 aa16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 BST2Q10589 180 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-216ENST00000488384 USP4Q13107 963 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms