RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 RGS7P49802 495 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 PDE6CP51160 858 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 ARID5AQ03989 594 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 TAF3Q5VWG9 929 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 E4F1Q66K89 784 aaPredicted RBP11.67□□□□□ -0.54
UBE4B-210ENST00000488228 CACNA2D4Q7Z3S7 1137 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 NOP9Q86U38 636 aaKnown RBP11.67□□□□□ -0.54
UBE4B-210ENST00000488228 NUP93Q8N1F7 819 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 EPS8L1Q8TE68 723 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 SLC20A1Q8WUM9 679 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 BAP1Q92560 729 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 MYRFLQ96LU7 910 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 ATXN3LQ9H3M9 355 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 CDH7Q9ULB5 785 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 KIAA1257Q9ULG3 409 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 DAAM1Q9Y4D1 1078 aa11.67□□□□□ -0.54
UBE4B-210ENST00000488228 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 PIK3R2O00459 728 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 XPO1O14980 1071 aaKnown RBP11.66□□□□□ -0.54
UBE4B-210ENST00000488228 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 RTN3O95197 1032 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-210ENST00000488228 F11P03951 625 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 TPM3P06753 285 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 CYP11B1P15538 503 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 CDC25CP30307 473 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 STAT1P42224 750 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 PTK2Q05397 1052 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 ADIGQ0VDE8 80 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 TAF10Q12962 218 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 STILQ15468 1287 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 CNGA2Q16280 664 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 GPR158Q5T848 1215 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 OTOP3Q7RTS5 596 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 FBXO32Q969P5 355 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 MCRS1Q96EZ8 462 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 TRPC7Q9HCX4 862 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 PNPLA8Q9NP80 782 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 GMIPQ9P107 970 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 UXTQ9UBK9 157 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-210ENST00000488228 PRKAG3Q9UGI9 489 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
UBE4B-210ENST00000488228 NR2E1Q9Y466 385 aa11.66□□□□□ -0.54
UBE4B-210ENST00000488228 NCANO14594 1321 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 A0A0C4DFX4 3053 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 ZNF197O14709 1029 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 MED7O43513 233 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 GABBR2O75899 941 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 FGF19O95750 216 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 GYPCP04921 128 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 ASGR2P07307 311 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 YWHAQP27348 245 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 PLA2G4AP47712 749 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 PGFP49763 221 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 KIF11P52732 1056 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 SLC8A3P57103 927 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 PMF1Q6P1K2 205 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 SARM1Q6SZW1 724 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 C1orf131Q8NDD1 294 aaKnown RBP11.65□□□□□ -0.54
UBE4B-210ENST00000488228 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.54
UBE4B-210ENST00000488228 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 UHRF1Q96T88 793 aaPredicted RBP11.65□□□□□ -0.54
UBE4B-210ENST00000488228 SMG9Q9H0W8 520 aaKnown RBP11.65□□□□□ -0.54
UBE4B-210ENST00000488228 CD320Q9NPF0 282 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 CYTH4Q9UIA0 394 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 USTQ9Y2C2 406 aa11.65□□□□□ -0.54
UBE4B-210ENST00000488228 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 FAM92AA1XBS5 289 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 C2orf78A6NCI8 922 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 PRAMEF12O95522 483 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 ABL1P00519 1130 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 MMEP08473 750 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 USP17L7P0C7H9 530 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 LAMP2P13473 410 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 LCP1P13796 627 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 FCARP24071 287 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 GPD2P43304 727 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 TKTL1P51854 596 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 BPIFB4P59827 614 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 PDCLQ13371 301 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 HTR4Q13639 388 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 MEA1Q16626 185 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 ARHGAP15Q53QZ3 475 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 RAB41Q5JT25 222 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 FAM78AQ5JUQ0 283 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 VSTM4Q8IW00 320 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 SIX6OS1Q8N1H7 587 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-210ENST00000488228 SLC35F5Q8WV83 523 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 CPLX3Q8WVH0 158 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms