RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNF268Q14587 947 aaPredicted RBP5.28□□□□□ -1.56
SMC4-219ENST00000487747 MLC1Q15049 377 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 MEX3CQ5U5Q3 659 aaKnown RBP5.28□□□□□ -1.56
SMC4-219ENST00000487747 LMBRD2Q68DH5 695 aaPredicted RBP5.28□□□□□ -1.56
SMC4-219ENST00000487747 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 SHC4Q6S5L8 630 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 B3GNT9Q6UX72 402 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 ZDHHC24Q6UX98 284 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 KBTBD7Q8WVZ9 684 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 WASF1Q92558 559 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 COQ8BQ96D53 544 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 TMEM79Q9BSE2 394 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 DPH1Q9BZG8 443 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 ATP6V0A4Q9HBG4 840 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 TRMT13Q9NUP7 481 aaKnown RBP5.28□□□□□ -1.56
SMC4-219ENST00000487747 AMFRQ9UKV5 643 aa5.28□□□□□ -1.56
SMC4-219ENST00000487747 UBE2Q2LH0YL09 131 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 H3BML4 177 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 PMPCBO75439 489 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
SMC4-219ENST00000487747 GKP32189 559 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 TTC3P53804 2025 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 SATB1Q01826 763 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 SEC23BQ15437 767 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 PTPROQ16827 1216 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 ZNF783Q6ZMS7 281 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 ZNF517Q6ZMY9 492 aaPredicted RBP5.27□□□□□ -1.57
SMC4-219ENST00000487747 ZNF813Q6ZN06 617 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 KCTD20Q7Z5Y7 419 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 MPP5Q8N3R9 675 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 ADAMTS18Q8TE60 1221 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 MAML1Q92585 1016 aa5.27□□□□□ -1.57
SMC4-219ENST00000487747 CES2O00748 559 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 XRCC6P12956 609 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC4-219ENST00000487747 MCL1Q07820 350 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 LMAN2Q12907 356 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 SLC13A2Q13183 592 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 LAMB3Q13751 1172 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 TRIM71Q2Q1W2 868 aaKnown RBP5.26□□□□□ -1.57
SMC4-219ENST00000487747 DCAF12L1Q5VU92 463 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 DAAM2Q86T65 1068 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 SIRT6Q8N6T7 355 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 OR6B3Q8NGW1 331 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 DNAJB14Q8TBM8 379 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 ZNF398Q8TD17 642 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 PNISRQ8TF01 805 aaKnown RBP5.26□□□□□ -1.57
SMC4-219ENST00000487747 CTHRC1Q96CG8 243 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 RSPRY1Q96DX4 576 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 FAM118BQ9BPY3 351 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 RTFDC1Q9BY42 306 aaPredicted RBP5.26□□□□□ -1.57
SMC4-219ENST00000487747 MTMR4Q9NYA4 1195 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 TFCP2L1Q9NZI6 479 aa5.26□□□□□ -1.57
SMC4-219ENST00000487747 DRG1Q9Y295 367 aaKnown RBP5.26□□□□□ -1.57
SMC4-219ENST00000487747 SOCS2O14508 198 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 GCATO75600 419 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 FGBP02675 491 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 A1BGP04217 495 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
SMC4-219ENST00000487747 APEHP13798 732 aaKnown RBP5.25□□□□□ -1.57
SMC4-219ENST00000487747 PRF1P14222 555 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 COPB1P53618 953 aaKnown RBP5.25□□□□□ -1.57
SMC4-219ENST00000487747 POLGP54098 1239 aaPredicted RBP5.25□□□□□ -1.57
SMC4-219ENST00000487747 SWSAP1Q6NVH7 229 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 SFTPA1Q8IWL2 248 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 ZBTB34Q8NCN2 500 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 OR56A3Q8NH54 315 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 C16orf52Q8NHV5 167 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 JPH3Q8WXH2 748 aaPredicted RBP5.25□□□□□ -1.57
SMC4-219ENST00000487747 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
SMC4-219ENST00000487747 USP19O94966 1318 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 LY6G6EA0A0G2JKS1 128 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 A0A1W2PPL8 197 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 DSCR3O14972 297 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 AKAP10O43572 662 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 SPRY2O43597 315 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 MT-CO3P00414 261 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 HOXB6P17509 224 aaKnown RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 DIO1P49895 249 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 BCAT1P54687 386 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 CCNIQ14094 377 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 TTF1Q15361 905 aaPredicted RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 RBMS2Q15434 407 aaKnown RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 CERCAMQ5T4B2 595 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 OVCH2Q7RTZ1 564 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 SAMD14Q8IZD0 417 aaPredicted RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 IL31RAQ8NI17 732 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 ZCRB1Q8TBF4 217 aaKnown RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 MAP4K1Q92918 833 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 ZBTB45Q96K62 511 aaPredicted RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 CCDC17Q96LX7 622 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 FYTTD1Q96QD9 318 aaKnown RBP5.24□□□□□ -1.57
SMC4-219ENST00000487747 STK32BQ9NY57 414 aa5.24□□□□□ -1.57
SMC4-219ENST00000487747 TMEM232C9JQI7 657 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms