RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SMOQ99835 787 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 DUSP9Q99956 384 aaKnown RBP21.67■■□□□ 1.06
HDAC4-209ENST00000487617 DNAI2Q9GZS0 605 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 EBF3Q9H4W6 596 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 LMAN1LQ9HAT1 526 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 METTL14Q9HCE5 456 aaKnown RBP21.67■■□□□ 1.06
HDAC4-209ENST00000487617 CTNND2Q9UQB3 1225 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 PTPRDP23468 1912 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 BICDL2A1A5D9 508 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 FAM200BP0CF97 657 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 MAP3K7CLP57077 242 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 USP4Q13107 963 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 RUNX3Q13761 415 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 CAMK4Q16566 473 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 CCDC40Q4G0X9 1142 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 TTI2Q6NXR4 508 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 FILIP1Q7Z7B0 1213 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 SCAMP5Q8TAC9 235 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 SH3RF2Q8TEC5 729 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 WHAMMQ8TF30 809 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 SLC35C1Q96A29 364 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 CYFIP2Q96F07 1278 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 FAXDC2Q96IV6 333 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 HPS4Q9NQG7 708 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 ARHGAP26Q9UNA1 814 aa21.66■■□□□ 1.06
HDAC4-209ENST00000487617 F5P12259 2224 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 OBSL1O75147 1896 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 PROB1E7EW31 1015 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 TNFRSF10BO14763 440 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 BEST1O76090 585 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 SP9P0CG40 484 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 ARSAP15289 507 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 PDGFRLQ15198 375 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 ZNF394Q53GI3 561 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 TXNDC11Q6PKC3 985 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 MAML2Q8IZL2 1156 aaPredicted RBP21.65■■□□□ 1.06
HDAC4-209ENST00000487617 PDZD8Q8NEN9 1154 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 ZMIZ2Q8NF64 920 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 OVCA2Q8WZ82 227 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 TATDN2Q93075 761 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 HNRNPABQ99729 332 aaKnown RBP21.65■■□□□ 1.06
HDAC4-209ENST00000487617 CHRDQ9H2X0 955 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 CSNK1G1Q9HCP0 422 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 DUS2Q9NX74 493 aaKnown RBP21.65■■□□□ 1.06
HDAC4-209ENST00000487617 COQ4Q9Y3A0 265 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 MIA3Q5JRA6 1907 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 DENND4CQ5VZ89 1909 aa21.65■■□□□ 1.06
HDAC4-209ENST00000487617 PIEZO1Q92508 2521 aa21.64■■□□□ 1.06
HDAC4-209ENST00000487617 CHRNB1P11230 501 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 STX17P56962 302 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 MTAPQ13126 283 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 PAK1Q13153 545 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 PON2Q15165 354 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 TTC39CQ8N584 583 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 OSCP1Q8WVF1 389 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 HEXIM2Q96MH2 286 aaKnown RBP21.64■■□□□ 1.05
HDAC4-209ENST00000487617 ARID3AQ99856 593 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 RNF38Q9H0F5 515 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 CISHQ9NSE2 258 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 COMMD8Q9NX08 183 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 IL37Q9NZH6 218 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 CHORDC1Q9UHD1 332 aaPredicted RBP21.64■■□□□ 1.05
HDAC4-209ENST00000487617 WNT6Q9Y6F9 365 aa21.64■■□□□ 1.05
HDAC4-209ENST00000487617 GREB1Q4ZG55 1949 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 OTOL1A6NHN0 477 aaPredicted RBP21.63■■□□□ 1.05
HDAC4-209ENST00000487617 GFRA3O60609 400 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 OAS1P00973 400 aaKnown RBP21.63■■□□□ 1.05
HDAC4-209ENST00000487617 TCF3P15923 654 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 IFNAR2P48551 515 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 SLC7A9P82251 487 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 CSTF1Q05048 431 aaKnown RBP21.63■■□□□ 1.05
HDAC4-209ENST00000487617 LRRC32Q14392 662 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 FOXR2Q6PJQ5 311 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 TRIML1Q8N9V2 468 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 JAKMIP2Q96AA8 810 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 RBM12Q9NTZ6 932 aaKnown RBP21.63■■□□□ 1.05
HDAC4-209ENST00000487617 KIAA1468Q9P260 1216 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 FBXO4Q9UKT5 387 aa21.63■■□□□ 1.05
HDAC4-209ENST00000487617 LEFTY2O00292 366 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 OLFM2O95897 454 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 FMO5P49326 533 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 CLEC20AQ6ZU45 233 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 CPA6Q8N4T0 437 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 NKD2Q969F2 451 aaPredicted RBP21.62■■□□□ 1.05
HDAC4-209ENST00000487617 IER2Q9BTL4 223 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 FBXO44Q9H4M3 255 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 SMPD4Q9NXE4 827 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 GMIPQ9P107 970 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 CPQQ9Y646 472 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 R4GN57 208 aa21.62■■□□□ 1.05
HDAC4-209ENST00000487617 MBL2P11226 248 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-209ENST00000487617 RAD23BP54727 409 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 ZXDBP98169 803 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 AMPD2Q01433 879 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 LRMPQ12912 555 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 CUL2Q13617 745 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 DGKKQ5KSL6 1271 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 HECTD3Q5T447 861 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 PPP1R26Q5T8A7 1209 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-209ENST00000487617 ZC3H14Q6PJT7 736 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms