RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 RTN3O95197 1032 aaPredicted RBP25.07■■□□□ 1.6
PLOD3-215ENST00000487563 NFATC1O95644 943 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 NR2F2P24468 414 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 YWHAQP27348 245 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 GALK1P51570 392 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 DPYDQ12882 1025 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 TAF4BQ92750 862 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 CD101Q93033 1021 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 CCDC34Q96HJ3 373 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 SDCBP2Q9H190 292 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 TMEM30AQ9NV96 361 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 SLC8A2Q9UPR5 921 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 MAPK8IP1Q9UQF2 711 aa25.07■■□□□ 1.6
PLOD3-215ENST00000487563 LEFTY2O00292 366 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 IKBKBO14920 756 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 TRIM21P19474 475 aaKnown RBP25.06■■□□□ 1.6
PLOD3-215ENST00000487563 VAMP7P51809 220 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 SRSF5Q13243 272 aaKnown RBP25.06■■□□□ 1.6
PLOD3-215ENST00000487563 PKN3Q6P5Z2 889 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 CEP68Q76N32 757 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 SV2AQ7L0J3 742 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.06■■□□□ 1.6
PLOD3-215ENST00000487563 ACOT1Q86TX2 421 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 PDZD8Q8NEN9 1154 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 FBXO32Q969P5 355 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 SMARCD1Q96GM5 515 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 IMPG2Q9BZV3 1241 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 GOLPH3LQ9H4A5 285 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 DMAP1Q9NPF5 467 aaPredicted RBP25.06■■□□□ 1.6
PLOD3-215ENST00000487563 SMPD4Q9NXE4 827 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 CPQQ9Y646 472 aa25.06■■□□□ 1.6
PLOD3-215ENST00000487563 KRT13P13646 458 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 HOXA6P31267 233 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 SLC7A9P82251 487 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 FBXO43Q4G163 708 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 NAIF1Q69YI7 327 aaPredicted RBP25.05■■□□□ 1.6
PLOD3-215ENST00000487563 LINC00597Q9H2U6 94 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 GDPD2Q9HCC8 539 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 FBRSL1Q9HCM7 1045 aaKnown RBP25.05■■□□□ 1.6
PLOD3-215ENST00000487563 KRT82Q9NSB4 513 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 FRYLO94915 3013 aa25.05■■□□□ 1.6
PLOD3-215ENST00000487563 MAPK13O15264 365 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 HRO43593 1189 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 AP1G2O75843 785 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 ZNF202O95125 648 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 HLA-DRAP01903 254 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 MBL2P11226 248 aaPredicted RBP25.04■■□□□ 1.6
PLOD3-215ENST00000487563 RPL13P26373 211 aaKnown RBP25.04■■□□□ 1.6
PLOD3-215ENST00000487563 PUM1Q14671 1186 aaKnown RBP eCLIP25.04■■□□□ 1.6
PLOD3-215ENST00000487563 INTS8Q75QN2 995 aaKnown RBP25.04■■□□□ 1.6
PLOD3-215ENST00000487563 WDR5BQ86VZ2 330 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 FAM186BQ8IYM0 893 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 GUF1Q8N442 669 aaKnown RBP25.04■■□□□ 1.6
PLOD3-215ENST00000487563 KCNK16Q96T55 309 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 RNF38Q9H0F5 515 aa25.04■■□□□ 1.6
PLOD3-215ENST00000487563 ASS1P00966 412 aaKnown RBP25.03■■□□□ 1.6
PLOD3-215ENST00000487563 OAS1P00973 400 aaKnown RBP25.03■■□□□ 1.6
PLOD3-215ENST00000487563 CCDC130P13994 396 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 NDST1P52848 882 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 SLC5A3P53794 718 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 LMNB2Q03252 620 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 ORC1Q13415 861 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 NFIL3Q16649 462 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 SPOPLQ6IQ16 392 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 DGLUCYQ7Z3D6 616 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 DDX42Q86XP3 938 aaKnown RBP eCLIP25.03■■□□□ 1.6
PLOD3-215ENST00000487563 OVCA2Q8WZ82 227 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 MMRN2Q9H8L6 949 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.03■■□□□ 1.67e-11■■■■■ 86.9
PLOD3-215ENST00000487563 CFAP97Q9P2B7 532 aa25.03■■□□□ 1.6
PLOD3-215ENST00000487563 SLC9A3R1O14745 358 aaPredicted RBP25.02■■□□□ 1.6
PLOD3-215ENST00000487563 AKAP3O75969 853 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 OLFM2O95897 454 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 RETP07949 1114 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 TRIM49P0CI25 452 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 TRIM49CP0CI26 452 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 HOXC13P31276 330 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 PXNP49023 591 aaPredicted RBP25.02■■□□□ 1.6
PLOD3-215ENST00000487563 ZXDBP98169 803 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 SPEM2Q0P670 501 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 RSPO4Q2I0M5 234 aaPredicted RBP25.02■■□□□ 1.6
PLOD3-215ENST00000487563 C1orf220Q5T0J3 134 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 FILIP1Q7Z7B0 1213 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 UNC93AQ86WB7 457 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 FUKQ8N0W3 1084 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 RPLP0P6Q8NHW5 317 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 HMGXB4Q9UGU5 601 aa25.02■■□□□ 1.6
PLOD3-215ENST00000487563 SCAMP3O14828 347 aaKnown RBP25.01■■□□□ 1.59
PLOD3-215ENST00000487563 PSMC2P35998 433 aaKnown RBP25.01■■□□□ 1.59
PLOD3-215ENST00000487563 ASPAP45381 313 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 GCLMP48507 274 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 BECN1Q14457 450 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 PAQR9Q6ZVX9 377 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 CCDC150Q8NCX0 1101 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 CCDC26Q8TAB7 109 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 SCAMP5Q8TAC9 235 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 SLC2A14Q8TDB8 520 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 ACDQ96AP0 544 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 FAM49BQ9NUQ9 324 aa25.01■■□□□ 1.59
PLOD3-215ENST00000487563 GOLGA6L4A6NEF3 574 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms