RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 SLC41A1Q8IVJ1 513 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 HSPA12BQ96MM6 686 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 PNMA5Q96PV4 448 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
NME1-208ENST00000487481 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 SUSD2Q9UGT4 822 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
NME1-208ENST00000487481 GOLGA4Q13439 2230 aaKnown RBP16.3■□□□□ 0.2
NME1-208ENST00000487481 IGHV1OR15-9A0A0B4J2B8 117 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 KALRNO60229 2985 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 HUS1O60921 280 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 ZNF217O75362 1048 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 PCSK1P29120 753 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
NME1-208ENST00000487481 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 SLFN12LQ6IEE8 588 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
NME1-208ENST00000487481 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 ZDHHC5Q9C0B5 715 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 PARVGQ9HBI0 331 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
NME1-208ENST00000487481 KIAA1522Q9P206 1035 aaPredicted RBP16.29■□□□□ 0.2
NME1-208ENST00000487481 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
NME1-208ENST00000487481 CBFA2T3O75081 653 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 FAM13AO94988 1023 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 IL18RAPO95256 599 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 OLFM2O95897 454 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 POLR2BP30876 1174 aaKnown RBP16.28■□□□□ 0.2
NME1-208ENST00000487481 ZNF131P52739 623 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
NME1-208ENST00000487481 RHBDF2Q6PJF5 856 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
NME1-208ENST00000487481 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 UBL7Q96S82 380 aaPredicted RBP16.28■□□□□ 0.2
NME1-208ENST00000487481 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 PCOLCE2Q9UKZ9 415 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 CPQQ9Y646 472 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
NME1-208ENST00000487481 SHROOM3Q8TF72 1996 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 A0A087WV48 116 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 ANKRD63C9JTQ0 380 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 ZBTB24O43167 697 aaPredicted RBP16.27■□□□□ 0.2
NME1-208ENST00000487481 TRAK2O60296 914 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 HOXB2P14652 356 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 GNSP15586 552 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 PPP3CCP48454 512 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 LHX1P48742 406 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 GTF2BQ00403 316 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 GRIK2Q13002 908 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 TMEM119Q4V9L6 283 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 VSTM1Q6UX27 236 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 TMPRSS7Q7RTY8 843 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 OSTM1Q86WC4 334 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 RGL4Q8IZJ4 473 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 ZNF419Q96HQ0 510 aaPredicted RBP16.27■□□□□ 0.2
NME1-208ENST00000487481 PLIN2Q99541 437 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 TTLL2Q9BWV7 592 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
NME1-208ENST00000487481 ZNF840PA6NDX5 716 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 TISP43B9A030 160 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 GABRDO14764 452 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
NME1-208ENST00000487481 ITGB3P05106 788 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
NME1-208ENST00000487481 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 GPBP1Q86WP2 473 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 FOXJ1Q92949 421 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 FIZ1Q96SL8 496 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
NME1-208ENST00000487481 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 CFAP97Q9P2B7 532 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 CYP8B1Q9UNU6 501 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 AGAP1Q9UPQ3 857 aa16.26■□□□□ 0.19
NME1-208ENST00000487481 A0A1W2PQF6 199 aa16.25■□□□□ 0.19
NME1-208ENST00000487481 TK2O00142 265 aa16.25■□□□□ 0.19
NME1-208ENST00000487481 HOXC11O43248 304 aaPredicted RBP16.25■□□□□ 0.19
NME1-208ENST00000487481 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
NME1-208ENST00000487481 NDUFV2P19404 249 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms