RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 IKBKBO14920 756 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 LRP3O75074 770 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 KRT13P13646 458 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 PXNP49023 591 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 DLG4P78352 724 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 ZACNQ401N2 412 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 PARD6AQ9NPB6 346 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 DMAP1Q9NPF5 467 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
SREBF1-215ENST00000487401 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
SREBF1-215ENST00000487401 CCDC163A0A0D9SF12 145 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 A0A1W2PQ27 194 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 A0A1W2PQ64 194 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 A0A1W2PQD8 194 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 AP1G2O75843 785 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 MBL2P11226 248 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-215ENST00000487401 TGM1P22735 817 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 NR2F2P24468 414 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 RPL13P26373 211 aaKnown RBP13.21□□□□□ -0.29
SREBF1-215ENST00000487401 HOXC13P31276 330 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 VAMP7P51809 220 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 NDST1P52848 882 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 ZXDBP98169 803 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 HECTD3Q5T447 861 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 KRBA2Q6ZNG9 492 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 FAM35AQ86V20 835 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 UNC93AQ86WB7 457 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 CAMKK1Q8N5S9 505 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 OVCA2Q8WZ82 227 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 ACDQ96AP0 544 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 SDCBP2Q9H190 292 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.29
SREBF1-215ENST00000487401 TMEM30AQ9NV96 361 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 F5P12259 2224 aa13.21□□□□□ -0.29
SREBF1-215ENST00000487401 SCN1AP35498 2009 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 MAPK13O15264 365 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 ASS1P00966 412 aaKnown RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 SLC5A3P53794 718 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 DPYDQ12882 1025 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 ORC1Q13415 861 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 PAQR9Q6ZVX9 377 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 INTS8Q75QN2 995 aaKnown RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 ADGRG2Q8IZP9 1017 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 CRYBG2Q8N1P7 616 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 FAM160A2Q8N612 972 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 HHIPQ96QV1 700 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 DNAI2Q9GZS0 605 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 NACA2Q9H009 215 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 SEMA4GQ9NTN9 838 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 POLR3BQ9NW08 1133 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-215ENST00000487401 CACNA1IQ9P0X4 2223 aa13.2□□□□□ -0.3
SREBF1-215ENST00000487401 TSC2P49815 1807 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 TNFRSF10BO14763 440 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
SREBF1-215ENST00000487401 AXIN1O15169 862 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-215ENST00000487401 AKAP3O75969 853 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 ZNF202O95125 648 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 APBB3O95704 486 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 OLFM2O95897 454 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 ADH1CP00326 375 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 CCDC130P13994 396 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
SREBF1-215ENST00000487401 GCLMP48507 274 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms