RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 A0A1B0GUL6 1792 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 F5H6K3 240 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 KDM1AO60341 852 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CRTAMO95727 393 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CALCAP01258 141 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 TFAP2AP05549 437 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 SNRPAP09012 282 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 SMIM18P0DKX4 95 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 KLRC2P26717 231 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 PCYT1AP49585 367 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 VCPP55072 806 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 TAS2R40P59535 323 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 MRPS22P82650 360 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 SYCP2LQ5T4T6 812 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 LLGL2Q6P1M3 1020 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 FBXL19Q6PCT2 694 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ZNF720Q7Z2F6 126 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 GPR141Q7Z602 305 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 NLRX1Q86UT6 975 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 HPS6Q86YV9 775 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CLVS1Q8IUQ0 354 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 MCOLN2Q8IZK6 566 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ALLCQ8N6M5 410 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 OLIG1Q8TAK6 271 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 EME1Q96AY2 570 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ACSF2Q96CM8 615 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 COX4I2Q96KJ9 171 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CORO1BQ9BR76 489 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 EIF2AQ9BY44 585 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 LIN28AQ9H9Z2 209 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 XAB2Q9HCS7 855 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 C6orf203Q9P0P8 240 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CDH22Q9UJ99 828 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 PACSIN3Q9UKS6 424 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 RAB26Q9ULW5 256 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ARHGAP26Q9UNA1 814 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 TNS2Q63HR2 1409 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 DDX39AO00148 427 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 TBX3O15119 743 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 KRT38O76015 456 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ATP5BP06576 529 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 SPATA31C1P0DKV0 1188 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 HOXD12P35452 270 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 PPARGP37231 505 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 HALP42357 657 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ENTPD1P49961 510 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 C6orf52Q5T4I8 152 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 WDR78Q5VTH9 848 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 KRT39Q6A163 491 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ERI1Q8IV48 349 aaKnown RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 KATNAL2Q8IYT4 538 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 LARGE2Q8N3Y3 721 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 MARVELD2Q8N4S9 558 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 C7orf26Q96N11 449 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 NACC1Q96RE7 527 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 FERMT1Q9BQL6 677 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 POLR3CQ9BUI4 534 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 OXCT2Q9BYC2 517 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 NRDE2Q9H7Z3 1164 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 COPS7BQ9H9Q2 264 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ARHGEF4Q9NR80 690 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 MTMR4Q9NYA4 1195 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 HSPBP1Q9NZL4 362 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 PKD2L1Q9P0L9 805 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 PSMD13Q9UNM6 376 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 POMPQ9Y244 141 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 COQ6Q9Y2Z9 468 aa6.49□□□□□ -1.37
VPS13D-209ENST00000487188 ARAP2Q8WZ64 1704 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 A0A088AWK7 358 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TMEM247A6NEH6 219 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 E5RJQ4 531 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 AIM2O14862 343 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ZMPSTE24O75844 475 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 NTSR2O95665 410 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 FDX1P10109 184 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 MCF2P10911 925 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 AKR1B1P15121 316 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 C21orf59P57076 290 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 GPX6P59796 221 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PLOD1Q02809 727 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 BMPR2Q13873 1038 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CCNIQ14094 377 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 DLGAP5Q15398 846 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 RNASEH2BQ5TBB1 312 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ITPRIPL1Q6GPH6 555 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 NDUFAF2Q8N183 169 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SERAC1Q96JX3 654 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CBWD1Q9BRT8 395 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 DRC3Q9H069 523 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 FAM96AQ9H5X1 160 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 AVENQ9NQS1 362 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ZBTB21Q9ULJ3 1066 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 POLIQ9UNA4 740 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PLA2G4CQ9UP65 541 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms