RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 TSPY26PQ9H489 355 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 CBX8Q9HC52 389 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 TLR8Q9NR97 1041 aaKnown RBP15.46■□□□□ 0.07
LIMS3-205ENST00000487150 IL37Q9NZH6 218 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.46■□□□□ 0.07
LIMS3-205ENST00000487150 M0QYV0 167 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 TNFRSF10BO14763 440 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 SERPINC1P01008 464 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 CKMP06732 381 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 ASGR2P07307 311 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 GJA1P17302 382 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 USP8P40818 1118 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 PLA2G4AP47712 749 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 SNX16P57768 344 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 TAF10Q12962 218 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 IQCB1Q15051 598 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 LRSAM1Q6UWE0 723 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 PARM1Q6UWI2 310 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 CCDC186Q7Z3E2 898 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 TMEM150AQ86TG1 271 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 DDX42Q86XP3 938 aaKnown RBP eCLIP15.45■□□□□ 0.06
LIMS3-205ENST00000487150 YAF2Q8IY57 180 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 CELF5Q8N6W0 485 aaKnown RBP15.45■□□□□ 0.06
LIMS3-205ENST00000487150 KIAA1958Q8N8K9 716 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 ZMIZ2Q8NF64 920 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 EDAQ92838 391 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 HSD3B7Q9H2F3 369 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 LRRC4Q9HBW1 653 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 TMEM30AQ9NV96 361 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 THG1LQ9NWX6 298 aaKnown RBP15.45■□□□□ 0.06
LIMS3-205ENST00000487150 SCML2Q9UQR0 700 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 C2orf16Q68DN1 1984 aa15.45■□□□□ 0.06
LIMS3-205ENST00000487150 ZNF840PA6NDX5 716 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 THAP12O43422 761 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 TADA3O75528 432 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 ATP1A3P13637 1013 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 PSMC3P17980 439 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 BRD2P25440 801 aaKnown RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 USP46P62068 366 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 ZXDAP98168 799 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SIGLEC14Q08ET2 396 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SYCP1Q15431 976 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 PIGZQ86VD9 579 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 FAM71AQ8IYT1 594 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SIX6OS1Q8N1H7 587 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SLC44A3Q8N4M1 653 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 MAB21L3Q8N8X9 362 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 DNASE1L2Q92874 299 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 FGF14Q92915 247 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 HSFY1Q96LI6 401 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 NOX5Q96PH1 765 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SPAG5Q96R06 1193 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 TRIM62Q9BVG3 475 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 STK33Q9BYT3 514 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 NACA2Q9H009 215 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 SLC2A4RGQ9NR83 387 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-205ENST00000487150 TDP1Q9NUW8 608 aa15.44■□□□□ 0.06
LIMS3-205ENST00000487150 A0A1W2PQC6 194 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 HHLA1C9JL84 531 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 F8VZ95 297 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 BEST1O76090 585 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 FCARP24071 287 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 ACADSBP45954 432 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 KIF11P52732 1056 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 PDE4CQ08493 712 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 GOLGA8FQ08AF8 430 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 GOLGA8DPQ0D2H9 430 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
LIMS3-205ENST00000487150 HECTD3Q5T447 861 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 GJB7Q6PEY0 223 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 LUZP1Q86V48 1076 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 TTC30AQ86WT1 665 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 SCML4Q8N228 414 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 STK32AQ8WU08 396 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 KCTD13Q8WZ19 329 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 IQCDQ96DY2 449 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 KXD1Q9BQD3 176 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
LIMS3-205ENST00000487150 CYLDQ9NQC7 956 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 FBXL21Q9UKT6 434 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 ARHGAP26Q9UNA1 814 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 SIK3Q9Y2K2 1263 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 MUC3AQ02505 3323 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 NCOR1O75376 2440 aa15.43■□□□□ 0.06
LIMS3-205ENST00000487150 FBXO21O94952 628 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms