RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KIAA0319LQ8IZA0 1049 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 JOSD2Q8TAC2 188 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 GATA6Q92908 595 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KRT82Q9NSB4 513 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 EP400Q96L91 3159 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 B2RBV5 119 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 F8W8V4 182 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 APOC4-APOC2K7ER74 178 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 COPEO14579 308 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ATG7O95352 703 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 APOC2P02655 101 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ARL2P36404 184 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 INHBEP58166 350 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 MYL6P60660 151 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 YWHAGP61981 247 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 DENND1BQ6P3S1 775 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 RFX6Q8HWS3 928 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 GALNT15Q8N3T1 639 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 FNIP1Q8TF40 1166 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 SRPK1Q96SB4 655 aaKnown RBP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 NIF3L1Q9GZT8 377 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
COL3A1-206ENST00000487010 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 WASF2Q9Y6W5 498 aa12.74□□□□□ -0.37
COL3A1-206ENST00000487010 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 MCF2LO15068 1137 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SPAG6O75602 509 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 RBP3P10745 1247 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 HARSP12081 509 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 KCNA3P22001 575 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 POLR2BP30876 1174 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 CPA2P48052 419 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 RBBP5Q15291 538 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 HSF5Q4G112 596 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PTPN20Q4JDL3 420 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TTC39BQ5VTQ0 682 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 CDHR3Q6ZTQ4 885 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 WDR49Q8IV35 697 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 BRSK2Q8IWQ3 736 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 KBTBD2Q8IY47 623 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PHC3Q8NDX5 983 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 CMASQ8NFW8 434 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 ZFAND2BQ8WV99 257 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 C7orf26Q96N11 449 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TRAPPC9Q96Q05 1148 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 ZNF184Q99676 751 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 IQCGQ9H095 443 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 DHX33Q9H6R0 707 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PNPLA8Q9NP80 782 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TRIM49D1C9J1S8 452 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 I3L4J1 428 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 FAM155BO75949 473 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 NRLP54845 237 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SUPT20HL1Q3ZLR7 823 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 NET1Q7Z628 596 aaPredicted RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SLC26A11Q86WA9 606 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 MTMR12Q9C0I1 747 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
COL3A1-206ENST00000487010 TJP2Q9UDY2 1190 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PLA2G4CQ9UP65 541 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 PLLPQ9Y342 182 aa12.73□□□□□ -0.37
COL3A1-206ENST00000487010 H3BRJ5 948 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 VWA5AO00534 786 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
COL3A1-206ENST00000487010 C1QAP02745 245 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 ENO1P06733 434 aaKnown RBP12.72□□□□□ -0.37
COL3A1-206ENST00000487010 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
COL3A1-206ENST00000487010 TNFSF9P41273 254 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 PSMC1P62191 440 aaKnown RBP12.72□□□□□ -0.37
COL3A1-206ENST00000487010 YWHAEP62258 255 aaKnown RBP12.72□□□□□ -0.37
COL3A1-206ENST00000487010 CBLBQ13191 982 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 GRM1Q13255 1194 aa12.72□□□□□ -0.37
COL3A1-206ENST00000487010 GSTA3Q16772 222 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms