RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZFPM1Q8IX07 1006 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ZBTB8BQ8NAP8 495 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 SPC24Q8NBT2 197 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 SLC16A11Q8NCK7 471 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 SLC25A43Q8WUT9 341 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 CABS1Q96KC9 395 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 C1orf74Q96LT6 269 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 OSBPL5Q9H0X9 879 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 PRKRIP1Q9H875 184 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 TCF7L1Q9HCS4 588 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 KMT5AQ9NQR1 393 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TDP1Q9NUW8 608 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 CLIC5Q9NZA1 410 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TRPM5Q9NZQ8 1165 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 STK39Q9UEW8 545 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TBK1Q9UHD2 729 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 PGAP2Q9UHJ9 254 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TPCN1Q9ULQ1 816 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 PAIP2BQ9ULR5 123 aaKnown RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 PCDHGB3Q9Y5G1 929 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 CCDC171Q6TFL3 1326 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 MIA2Q96PC5 1412 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 TCRBV7S2A1N4TA0A589 114 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 C2orf81A6NN90 581 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 TTC34A8MYJ7 566 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 IFRD1O00458 451 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 CYTH3O43739 400 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 AKAP8O43823 692 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 ABLIM3O94929 683 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 ELANEP08246 267 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 MGAT1P26572 445 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 CCT6AP40227 531 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 AMPHP49418 695 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 CLCN2P51788 898 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 KLF10Q13118 480 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 DYNC1I2Q13409 638 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 CUL3Q13618 768 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 SIM2Q14190 667 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 CFAP58Q5T655 872 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 VPS53Q5VIR6 699 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 KAZNQ674X7 775 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 ADALQ6DHV7 355 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 Q6ZPA2 131 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 MED25Q71SY5 747 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 CENPQQ7L2Z9 268 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 CHPFQ8IZ52 775 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 LSMEM2Q8N112 164 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 PRR18Q8N4B5 295 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 KIAA1524Q8TCG1 905 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 BRSK1Q8TDC3 778 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 NSUN6Q8TEA1 469 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 TSR2Q969E8 191 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 SMARCE1Q969G3 411 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 ZKSCAN4Q969J2 545 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 TBC1D31Q96DN5 1066 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 PHACTR3Q96KR7 559 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 DCLRE1CQ96SD1 692 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 CGREF1Q99674 301 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 JPH2Q9BR39 696 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 SLC46A2Q9BY10 475 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 PARD6BQ9BYG5 372 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 NACAP1Q9BZK3 213 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 TMPRSS5Q9H3S3 457 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 PARVGQ9HBI0 331 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 USP15Q9Y4E8 981 aaPredicted RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 MAP3K5Q99683 1374 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 RRBP1Q9P2E9 1410 aaKnown RBP5.91□□□□□ -1.46
COPS3-209ENST00000486810 NCOA3Q9Y6Q9 1424 aa5.91□□□□□ -1.46
COPS3-209ENST00000486810 DYTNA2CJ06 578 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CPLX1O14810 134 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 FZD7O75084 574 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 NCR1O76036 304 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 LDHAP00338 332 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 POMCP01189 267 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 SLPIP03973 132 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CYP1A2P05177 515 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 PDCP20941 246 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CASP2P42575 452 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CLNS1AP54105 237 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 TLE1Q04724 770 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 RAPGEF1Q13905 1077 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 DPYSQ14117 519 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 TNIP1Q15025 636 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 DACT2Q5SW24 774 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 C10orf76Q5T2E6 689 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CAPRIN2Q6IMN6 1127 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 MCM10Q7L590 875 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 ZNF627Q7L945 461 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 SLC15A3Q8IY34 581 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 GALNT15Q8N3T1 639 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CARNMT1Q8N4J0 409 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.9□□□□□ -1.46
COPS3-209ENST00000486810 TEX9Q8N6V9 391 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 PAF1Q8N7H5 531 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 LINC00469Q8N7U9 141 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 TRIM58Q8NG06 486 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms