RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 HYAL1Q12794 435 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 TCEAL5Q5H9L2 206 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 C10orf76Q5T2E6 689 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 OLFML1Q6UWY5 402 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 CCDC149Q6ZUS6 474 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 BHLHA9Q7RTU4 235 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 ERICH1Q86X53 443 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 XYLT1Q86Y38 959 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 SCML4Q8N228 414 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 STKLD1Q8NE28 680 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 IPO4Q8TEX9 1081 aaKnown RBP10.09□□□□□ -0.79
MCF2L-227ENST00000486806 HDAC7Q8WUI4 952 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 PIWIL1Q96J94 861 aaKnown RBP10.09□□□□□ -0.79
MCF2L-227ENST00000486806 VCPIP1Q96JH7 1222 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 TTLL2Q9BWV7 592 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 PLEKHA4Q9H4M7 779 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 TLE6Q9H808 572 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 ADAM22Q9P0K1 906 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 MTCH2Q9Y6C9 303 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 TRIOBPQ9H2D6 2365 aa10.09□□□□□ -0.79
MCF2L-227ENST00000486806 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PRRG1O14668 218 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 ZMYND10O75800 440 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 IPO7O95373 1038 aaKnown RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 GLP2RO95838 553 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 CALB1P05937 261 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 TMEM253P0C7T8 217 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 SPATA31D3P0C874 917 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 MYBL1P10243 752 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 HMGA1P17096 107 aaKnown RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 RRM1P23921 792 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.87e-9■■■■■ 32
MCF2L-227ENST00000486806 SCNN1AP37088 669 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 TKTL1P51854 596 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 VAV2P52735 878 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 GALCP54803 685 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 USP46P62068 366 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 KRT83P78385 493 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 RBM10P98175 930 aaKnown RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PLD1Q13393 1074 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 COL19A1Q14993 1142 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 SPA17Q15506 151 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 HABP4Q5JVS0 413 aaKnown RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 CYP4A22Q5TCH4 519 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 LIN9Q5TKA1 542 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PM20D1Q6GTS8 502 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 LLGL2Q6P1M3 1020 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 SPATA31D4Q6ZUB0 917 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 DENND5BQ6ZUT9 1274 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 ZDHHC17Q8IUH5 632 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 NUP93Q8N1F7 819 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 MSANTD4Q8NCY6 345 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 C3orf20Q8ND61 904 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 SCAMP5Q8TAC9 235 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PPP2R3CQ969Q6 453 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PSMG2Q969U7 264 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 C18orf8Q96DM3 657 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 ARHGEF26Q96DR7 871 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 MCRS1Q96EZ8 462 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 TRIM11Q96F44 468 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 ULBP1Q9BZM6 244 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 MIS12Q9H081 205 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 THAP2Q9H0W7 228 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 AVENQ9NQS1 362 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-227ENST00000486806 CNGB3Q9NQW8 809 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 STRIP2Q9ULQ0 834 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PCDHA13Q9Y5I0 950 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 PLXNA3P51805 1871 aa10.08□□□□□ -0.8
MCF2L-227ENST00000486806 A0A0U1RQJ8 604 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 PIK3R2O00459 728 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 PJA2O43164 708 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 FBXO21O94952 628 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 RTN3O95197 1032 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 CYP1A2P05177 515 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 HNRNPA1P09651 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 CCDC175P0C221 793 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 LCP1P13796 627 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ABCB4P21439 1286 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 MAGEA1P43355 309 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ALDH1A3P47895 512 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 DAOAP59103 153 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 MRPS5P82675 430 aaKnown RBP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 MTMR3Q13615 1198 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms