RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 GFRA3O60609 400 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 HDCP19113 662 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 NBL1P41271 181 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 AMPD2Q01433 879 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 ZNF77Q15935 545 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 TRIM68Q6AZZ1 485 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
CHMP3-208ENST00000486404 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 CPA6Q8N4T0 437 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 SH3RF2Q8TEC5 729 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 ATP2A3Q93084 1043 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 SLC22A12Q96S37 553 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 CYP2S1Q96SQ9 504 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 NACA2Q9H009 215 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 EBF3Q9H4W6 596 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 TMEM30AQ9NV96 361 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
CHMP3-208ENST00000486404 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 KIAA1549LQ6ZVL6 1849 aa13.66□□□□□ -0.22
CHMP3-208ENST00000486404 ZNF840PA6NDX5 716 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CILPO75339 1184 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
CHMP3-208ENST00000486404 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 YWHAEP62258 255 aaKnown RBP13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CETN1Q12798 172 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 PAK1Q13153 545 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 RUNX3Q13761 415 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 MORC3Q14149 939 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CBWD6Q4V339 395 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 ZNF394Q53GI3 561 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CBWD3Q5JTY5 395 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CBWD5Q5RIA9 395 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 DDX42Q86XP3 938 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 C12orf29Q8N999 325 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 OSCP1Q8WVF1 389 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 SEMA4DQ92854 862 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 NKD2Q969F2 451 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-208ENST00000486404 EXOC4Q96A65 974 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 TWNKQ96RR1 684 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 KCNK16Q96T55 309 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 CHRDQ9H2X0 955 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 SMPD4Q9NXE4 827 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 GCNT4Q9P109 453 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 WNT6Q9Y6F9 365 aa13.65□□□□□ -0.22
CHMP3-208ENST00000486404 SP9P0CG40 484 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 MBL2P11226 248 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-208ENST00000486404 ARSAP15289 507 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 CSTF1Q05048 431 aaKnown RBP13.64□□□□□ -0.23
CHMP3-208ENST00000486404 MTAPQ13126 283 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 PON2Q15165 354 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 CAMK4Q16566 473 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 DGKKQ5KSL6 1271 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 PAQR9Q6ZVX9 377 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 CYFIP2Q96F07 1278 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 FAXDC2Q96IV6 333 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 SMOQ99835 787 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 ARID3AQ99856 593 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 FAM83CQ9BQN1 747 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 FBXO44Q9H4M3 255 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 HPS4Q9NQG7 708 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 CISHQ9NSE2 258 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 COMMD8Q9NX08 183 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 GMIPQ9P107 970 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 FBXO4Q9UKT5 387 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 CPQQ9Y646 472 aa13.64□□□□□ -0.23
CHMP3-208ENST00000486404 SHISA7A6NL88 538 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 LEFTY2O00292 366 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 NFATC1O95644 943 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 OAS1P00973 400 aaKnown RBP13.63□□□□□ -0.23
CHMP3-208ENST00000486404 FMO5P49326 533 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 CCR3P51677 355 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 STX17P56962 302 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 SLC8A3P57103 927 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 SLC7A9P82251 487 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHMP3-208ENST00000486404 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 TTI2Q6NXR4 508 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 CLEC20AQ6ZU45 233 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 SCAMP5Q8TAC9 235 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 HEXIM2Q96MH2 286 aaKnown RBP13.63□□□□□ -0.23
CHMP3-208ENST00000486404 HNRNPABQ99729 332 aaKnown RBP13.63□□□□□ -0.23
CHMP3-208ENST00000486404 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-208ENST00000486404 R4GN57 208 aa13.63□□□□□ -0.23
CHMP3-208ENST00000486404 PRR23AA6NEV1 266 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms