RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 THEM5Q8N1Q8 247 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 TCEAL3Q969E4 200 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 MTMR12Q9C0I1 747 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 GKN1Q9NS71 199 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 HSFX1Q9UBD0 423 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 ARMCX3Q9UH62 379 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-226ENST00000486210 PCDHGA5Q9Y5G8 931 aa18.8■□□□□ 0.6
MCF2L-226ENST00000486210 TRDMT1O14717 391 aaKnown RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 IKBKBO14920 756 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 GNA14O95837 355 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 EGFP01133 1207 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 PROS1P07225 676 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 TUFMP49411 452 aaKnown RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 TAF6P49848 677 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 TAF12Q16514 161 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 PLK5Q496M5 336 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 DCAF17Q5H9S7 520 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 CDKAL1Q5VV42 579 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 TRIM68Q6AZZ1 485 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 TRIM59Q8IWR1 403 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 CXorf38Q8TB03 319 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 RIN3Q8TB24 985 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 ZNF560Q96MR9 790 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 SEPT5Q99719 369 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 DUSP15Q9H1R2 295 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 MMRN2Q9H8L6 949 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 METTL14Q9HCE5 456 aaKnown RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 FBRSL1Q9HCM7 1045 aaKnown RBP18.79■□□□□ 0.6
MCF2L-226ENST00000486210 DPP3Q9NY33 737 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 SLC8A2Q9UPR5 921 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 CCL26Q9Y258 94 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 ASPMQ8IZT6 3477 aa18.79■□□□□ 0.6
MCF2L-226ENST00000486210 CACNA1GO43497 2377 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 NUP205Q92621 2012 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 C1QTNF9BB2RNN3 333 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 RNF40O75150 1001 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 C4BPAP04003 597 aaKnown RBP18.78■□□□□ 0.6
MCF2L-226ENST00000486210 TMEM191BP0C7N4 346 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 C1QTNF9P0C862 333 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 CDC25CP30307 473 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 GCLMP48507 274 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 SMARCB1Q12824 385 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 RUNX3Q13761 415 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 DUOXA2Q1HG44 320 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-226ENST00000486210 PSAPL1Q6NUJ1 521 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 NT5DC4Q86YG4 428 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 SLC35C1Q96A29 364 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 ANKRD36BP1Q96IX9 119 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 EBF3Q9H4W6 596 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 VPS45Q9NRW7 570 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 SIX4Q9UIU6 781 aa18.78■□□□□ 0.6
MCF2L-226ENST00000486210 LAMA1P25391 3075 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 SMTNL1A8MU46 457 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 KCNJ18B7U540 433 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 PIRO00625 290 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 CYB561D2O14569 222 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 CYP11A1P05108 521 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 ZNF18P17022 549 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 ENPEPQ07075 957 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 GRSF1Q12849 480 aaKnown RBP eCLIP18.77■□□□□ 0.6
MCF2L-226ENST00000486210 KCNJ12Q14500 433 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 MGAT5BQ3V5L5 792 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 SV2CQ496J9 727 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 SLC39A12Q504Y0 691 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 TCERG1LQ5VWI1 586 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 TDRD10Q5VZ19 366 aaKnown RBP18.77■□□□□ 0.6
MCF2L-226ENST00000486210 RNF43Q68DV7 783 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 TRAPPC11Q7Z392 1133 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 GAS2L3Q86XJ1 694 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 CMTM8Q8IZV2 173 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 CAMKK1Q8N5S9 505 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
MCF2L-226ENST00000486210 CACTINQ8WUQ7 758 aaKnown RBP18.77■□□□□ 0.6
MCF2L-226ENST00000486210 HHIPQ96QV1 700 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 ZCWPW1Q9H0M4 648 aa18.77■□□□□ 0.6
MCF2L-226ENST00000486210 THG1LQ9NWX6 298 aaKnown RBP18.77■□□□□ 0.6
MCF2L-226ENST00000486210 ANO9A1A5B4 782 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 BECN2A8MW95 431 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 GIPC1O14908 333 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 DCLK1O15075 740 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 ATG13O75143 517 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 CAVIN2O95810 425 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 CST3P01034 146 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-226ENST00000486210 TNNC2P02585 160 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 ITGB3P05106 788 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 ATP1A3P13637 1013 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 PNPLA4P41247 253 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 MTIF2P46199 727 aaKnown RBP18.76■□□□□ 0.59
MCF2L-226ENST00000486210 CBWD6Q4V339 395 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 TCP11X2Q5H9J9 407 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 CBWD3Q5JTY5 395 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 CBWD5Q5RIA9 395 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 SV2AQ7L0J3 742 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 LRRTM3Q86VH5 581 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 FAM114A1Q8IWE2 563 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 DCP1BQ8IZD4 617 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms