RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RHOP08100 348 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 FSHRP23945 695 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 YWHAQP27348 245 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 CDC25CP30307 473 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 SLC5A3P53794 718 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 SNX16P57768 344 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 TFF2Q03403 129 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 MTMR3Q13615 1198 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 TDRD12Q587J7 1177 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 VPS36Q86VN1 386 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 PASD1Q8IV76 773 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 CNGA4Q8IV77 575 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 TMEM35BQ8NCS4 154 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 MSANTD4Q8NCY6 345 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 EPS8L1Q8TE68 723 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 FBXO32Q969P5 355 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 TRMT2BQ96GJ1 504 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 ZSWIM1Q9BR11 485 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 UBXN6Q9BZV1 441 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 SYNCQ9H7C4 482 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 ST7Q9NRC1 585 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 COMMD8Q9NX08 183 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 DNMT3BQ9UBC3 853 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
NUP50-216ENST00000486184 NOTCH4Q99466 2003 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 PAPLNO95428 1278 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 SLC34A2O95436 690 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 ADCY5O95622 1261 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 GABRR2P28476 465 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 PLA2G4AP47712 749 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 PSEN1P49768 467 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 NTHL1P78549 312 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 MRPS5P82675 430 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 CDR2Q01850 454 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 DENND1BQ6P3S1 775 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 TRIM72Q6ZMU5 477 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 GET4Q7L5D6 327 aaPredicted RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 PDZD8Q8NEN9 1154 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 MRPS31Q92665 395 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 SYN2Q92777 582 aaPredicted RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 ATXN3LQ9H3M9 355 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 SLITRK6Q9H5Y7 841 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 TMEM30AQ9NV96 361 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 TRPM5Q9NZQ8 1165 aa12.01□□□□□ -0.49
NUP50-216ENST00000486184 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
NUP50-216ENST00000486184 A0A1W2PRU2 124 aa12□□□□□ -0.49
NUP50-216ENST00000486184 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 LSM8O95777 96 aaKnown RBP12□□□□□ -0.49
NUP50-216ENST00000486184 ABL1P00519 1130 aa12□□□□□ -0.49
NUP50-216ENST00000486184 MMEP08473 750 aa12□□□□□ -0.49
NUP50-216ENST00000486184 LCP1P13796 627 aa12□□□□□ -0.49
NUP50-216ENST00000486184 TNFAIP3P21580 790 aa12□□□□□ -0.49
NUP50-216ENST00000486184 GBP2P32456 591 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 TIE1P35590 1138 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ACADSBP45954 432 aa12□□□□□ -0.49
NUP50-216ENST00000486184 PPP3CCP48454 512 aa12□□□□□ -0.49
NUP50-216ENST00000486184 RGS7P49802 495 aa12□□□□□ -0.49
NUP50-216ENST00000486184 TKTL1P51854 596 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ADIGQ0VDE8 80 aa12□□□□□ -0.49
NUP50-216ENST00000486184 PKDCCQ504Y2 493 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 C1orf131Q8NDD1 294 aaKnown RBP12□□□□□ -0.49
NUP50-216ENST00000486184 OR8K1Q8NGG5 319 aa12□□□□□ -0.49
NUP50-216ENST00000486184 SCAMP5Q8TAC9 235 aa12□□□□□ -0.49
NUP50-216ENST00000486184 GADD45GIP1Q8TAE8 222 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 SLC20A1Q8WUM9 679 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
NUP50-216ENST00000486184 ING5Q8WYH8 240 aa12□□□□□ -0.49
NUP50-216ENST00000486184 KCTD13Q8WZ19 329 aa12□□□□□ -0.49
NUP50-216ENST00000486184 SUSD6Q92537 303 aa12□□□□□ -0.49
NUP50-216ENST00000486184 GOLGA1Q92805 767 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ACSF2Q96CM8 615 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 HSFY1Q96LI6 401 aa12□□□□□ -0.49
NUP50-216ENST00000486184 MYRFLQ96LU7 910 aa12□□□□□ -0.49
NUP50-216ENST00000486184 AGPAT1Q99943 283 aa12□□□□□ -0.49
NUP50-216ENST00000486184 MIS12Q9H081 205 aa12□□□□□ -0.49
NUP50-216ENST00000486184 LHX5Q9H2C1 402 aa12□□□□□ -0.49
NUP50-216ENST00000486184 POMKQ9H5K3 350 aa12□□□□□ -0.49
NUP50-216ENST00000486184 ZNF334Q9HCZ1 680 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 AVENQ9NQS1 362 aaPredicted RBP12□□□□□ -0.49
NUP50-216ENST00000486184 CDH22Q9UJ99 828 aa12□□□□□ -0.49
NUP50-216ENST00000486184 NOCTQ9UK39 431 aaKnown RBP12□□□□□ -0.49
NUP50-216ENST00000486184 NR2E1Q9Y466 385 aa12□□□□□ -0.49
NUP50-216ENST00000486184 TCF20Q9UGU0 1960 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms