RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CAPN11Q9UMQ6 739 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 L1RE1Q9UN81 338 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 AGAP1Q9UPQ3 857 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SMG5Q9UPR3 1016 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 MRPS17Q9Y2R5 130 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 DERAQ9Y315 318 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 C2CD2Q9Y426 696 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 PTPRJQ12913 1337 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 MYBPHLA2RUH7 354 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 KPNA7A9QM74 516 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 MAN2B1O00754 1011 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 CHADO15335 359 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 NCAM2O15394 837 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 SLC16A3O15427 465 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 ATP2C2O75185 946 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 TADA3O75528 432 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 GCNT3O95395 438 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 CYP2F1P24903 491 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 CTHP32929 405 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 HOXD13P35453 343 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 PXNP49023 591 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 KPNA1P52294 538 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 KYAT1Q16773 422 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 DDR2Q16832 855 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 TXNDC8Q6A555 127 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 CREBRFQ8IUR6 639 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 TMEM139Q8IV31 216 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 YAF2Q8IY57 180 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 PDCL2Q8N4E4 241 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 MAB21L3Q8N8X9 362 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 LEMD2Q8NC56 503 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 CSGALNACT1Q8TDX6 532 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 SLC22A12Q96S37 553 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 NDST4Q9H3R1 872 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 TASP1Q9H6P5 420 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 FBRSL1Q9HCM7 1045 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 PDE11AQ9HCR9 933 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 TRPV5Q9NQA5 729 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 HPS4Q9NQG7 708 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 GKN1Q9NS71 199 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 LUC7L2Q9Y383 392 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 PCDHGA2Q9Y5H1 932 aa10.02□□□□□ -0.81
TMEM39A-208ENST00000486159 K7ESF4 209 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 F11P03951 625 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 GYPCP04921 128 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ARSAP15289 507 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 LMO2P25791 158 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 MAGEA9P43362 315 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ATXN1P54253 815 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ZBED6P86452 979 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 CDK17Q00537 523 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 BFSP1Q12934 665 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ADAM9Q13443 819 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 CCDC40Q4G0X9 1142 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 MIIPQ5JXC2 388 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 E4F1Q66K89 784 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 SLFN12LQ6IEE8 588 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 PRR23BQ6ZRT6 265 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DGLUCYQ7Z3D6 616 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 METTL23Q86XA0 190 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 BRSK2Q8IWQ3 736 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 OR5B17Q8NGF7 314 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 OR8K1Q8NGG5 319 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 BPIFB1Q8TDL5 484 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 USP13Q92995 863 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ELMO3Q96BJ8 720 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 HVCN1Q96D96 273 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ACCSQ96QU6 501 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 CYP2S1Q96SQ9 504 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 PKMYT1Q99640 499 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 OXCT2Q9BYC2 517 aaPredicted RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 MTMR12Q9C0I1 747 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 GPR88Q9GZN0 384 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 EBF3Q9H4W6 596 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 TMEM206Q9H813 350 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNHIT6Q9NWK9 470 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DDX43Q9NXZ2 648 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DLL3Q9NYJ7 618 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 GTF3C4Q9UKN8 822 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DAAM1Q9Y4D1 1078 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ASB3Q9Y575 518 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 MAP1BP46821 2468 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF638Q14966 1978 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-208ENST00000486159 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 DCDC2BA2VCK2 349 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 DPYSL4O14531 572 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 EXTL3O43909 919 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 KRT19P08727 400 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms