RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ZHX3Q9H4I2 956 aa20.61■□□□□ 0.89
CHRD-216ENST00000486066 CD248Q9HCU0 757 aa20.61■□□□□ 0.89
CHRD-216ENST00000486066 HCN2Q9UL51 889 aa20.61■□□□□ 0.89
CHRD-216ENST00000486066 NME7Q9Y5B8 376 aa20.61■□□□□ 0.89
CHRD-216ENST00000486066 HELZ2Q9BYK8 2649 aaKnown RBP20.6■□□□□ 0.89
CHRD-216ENST00000486066 H0Y626 953 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 TRIM16O95361 564 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 DDIT3P35638 169 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 NOP14P78316 857 aaKnown RBP20.6■□□□□ 0.89
CHRD-216ENST00000486066 LYSMD4Q5XG99 296 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 DENND5BQ6ZUT9 1274 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 ETFBKMTQ8IXQ9 262 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 MYLPFQ96A32 169 aa20.6■□□□□ 0.89
CHRD-216ENST00000486066 PTPRJQ12913 1337 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 ATXN2Q99700 1313 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 GJB3O75712 270 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 CD59P13987 128 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 GARTP22102 1010 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 TIE1P35590 1138 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 LONP1P36776 959 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 GRIA2P42262 883 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 TNFRSF4P43489 277 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 EOGTQ5NDL2 527 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 L1TD1Q5T7N2 865 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 C4orf50Q6ZRC1 276 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 CSGALNACT2Q8N6G5 542 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 DNAJC19Q96DA6 116 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 SAAL1Q96ER3 474 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 ZFRQ96KR1 1074 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 DUSP9Q99956 384 aaKnown RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 SYT15Q9BQS2 421 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 POLMQ9NP87 494 aaPredicted RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 FSCN3Q9NQT6 498 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 TMEM30AQ9NV96 361 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 RBAKQ9NYW8 714 aaPredicted RBP20.59■□□□□ 0.89
CHRD-216ENST00000486066 TRPM5Q9NZQ8 1165 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 CDH9Q9ULB4 789 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 SLC6A14Q9UN76 642 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 GPSM3Q9Y4H4 160 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 CPQQ9Y646 472 aa20.59■□□□□ 0.89
CHRD-216ENST00000486066 MYMKA6NI61 221 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 SERPINF2P08697 491 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 BDNFP23560 247 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 PPP3CCP48454 512 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 PSMC1P62191 440 aaKnown RBP20.58■□□□□ 0.89
CHRD-216ENST00000486066 RBP5P82980 135 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 LMBRD2Q68DH5 695 aaPredicted RBP20.58■□□□□ 0.89
CHRD-216ENST00000486066 CACTINQ8WUQ7 758 aaKnown RBP20.58■□□□□ 0.89
CHRD-216ENST00000486066 MTMR12Q9C0I1 747 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 ZDHHC4Q9NPG8 344 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 MAGEC2Q9UBF1 373 aaPredicted RBP20.58■□□□□ 0.89
CHRD-216ENST00000486066 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.89
CHRD-216ENST00000486066 PTPRBP23467 1997 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 SLC9A3R1O14745 358 aaPredicted RBP20.57■□□□□ 0.88
CHRD-216ENST00000486066 APODP05090 189 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 CASP5P51878 434 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 RESTQ13127 1097 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 DUOXA1Q1HG43 343 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 CHCHD4Q8N4Q1 142 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 CEP76Q8TAP6 659 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 KCNV2Q8TDN2 545 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 HMGB4Q8WW32 186 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 PCED1BQ96HM7 432 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 C8orf48Q96LL4 319 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 CBWD1Q9BRT8 395 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 PDE11AQ9HCR9 933 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 ARHGEF4Q9NR80 690 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 DNAAF2Q9NVR5 837 aaKnown RBP20.57■□□□□ 0.88
CHRD-216ENST00000486066 KALRNO60229 2985 aa20.57■□□□□ 0.88
CHRD-216ENST00000486066 TCRBV21S2A2A0A5A6 115 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 MAP3K13O43283 966 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 LDHAP00338 332 aaKnown RBP20.56■□□□□ 0.88
CHRD-216ENST00000486066 ADH5P11766 374 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 GABRG2P18507 467 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 WARSP23381 471 aaKnown RBP20.56■□□□□ 0.88
CHRD-216ENST00000486066 CACNA2D1P54289 1103 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 BYSLQ13895 437 aaKnown RBP20.56■□□□□ 0.88
CHRD-216ENST00000486066 USP49Q70CQ1 688 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 TTC30AQ86WT1 665 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 KRI1Q8N9T8 703 aaKnown RBP20.56■□□□□ 0.88
CHRD-216ENST00000486066 MYCBPAPQ8TBZ2 947 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 FGFBP2Q9BYJ0 223 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 OLFML3Q9NRN5 406 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 INTS13Q9NVM9 706 aa20.56■□□□□ 0.88
CHRD-216ENST00000486066 ASH1LQ9NR48 2969 aaKnown RBP20.55■□□□□ 0.88
CHRD-216ENST00000486066 A0A1W2PQF6 199 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 FRMD3A2A2Y4 597 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 F8VP50 259 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 SCAMP3O14828 347 aaKnown RBP20.55■□□□□ 0.88
CHRD-216ENST00000486066 AP5Z1O43299 807 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 ADH1CP00326 375 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 MAPRE1Q15691 268 aaKnown RBP20.55■□□□□ 0.88
CHRD-216ENST00000486066 ZNF423Q2M1K9 1284 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 SLC41A1Q8IVJ1 513 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 MINDY1Q8N5J2 469 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 OR5B17Q8NGF7 314 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms