RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PSMD5Q16401 504 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 MTERF2Q49AM1 385 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 AXDND1Q5T1B0 1012 aaPredicted RBP7.32□□□□□ -1.24
SMC4-217ENST00000485867 DAB2IPQ5VWQ8 1189 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 C19orf48Q6RUI8 117 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 VITQ6UXI7 678 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 PROSER1Q86XN7 944 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 MB21D2Q8IYB1 491 aaPredicted RBP7.32□□□□□ -1.24
SMC4-217ENST00000485867 NCOA7Q8NI08 942 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 ABHD4Q8TB40 342 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 CYB5D2Q8WUJ1 264 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 RABGGTAQ92696 567 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 DIRC2Q96SL1 478 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 TTPALQ9BTX7 342 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 EIF2AQ9BY44 585 aaKnown RBP7.32□□□□□ -1.24
SMC4-217ENST00000485867 MINDY3Q9H8M7 445 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 ZFP14Q9HCL3 533 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 UBN1Q9NPG3 1134 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 ANKFY1Q9P2R3 1169 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 KLK13Q9UKR3 277 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 IPPQ9Y573 584 aa7.32□□□□□ -1.24
SMC4-217ENST00000485867 SF3B1O75533 1304 aaKnown RBP eCLIP7.31□□□□□ -1.24
SMC4-217ENST00000485867 LNP1A1A4G5 178 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 E7EWF7 191 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 HIP1O00291 1037 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 ARNTLO00327 626 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 CILPO75339 1184 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 AKAP3O75969 853 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 STBD1O95210 358 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 CAPNS1P04632 268 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 CCDC192P0DO97 292 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 RAC2P15153 192 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 PSMC3P17980 439 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 MLLT6P55198 1093 aaPredicted RBP7.31□□□□□ -1.24
SMC4-217ENST00000485867 COL28A1Q2UY09 1125 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 TMTC3Q6ZXV5 915 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 FBXO15Q8NCQ5 510 aaPredicted RBP7.31□□□□□ -1.24
SMC4-217ENST00000485867 CNNM3Q8NE01 707 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 GSTCDQ8NEC7 633 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 LNX1Q8TBB1 728 aaPredicted RBP7.31□□□□□ -1.24
SMC4-217ENST00000485867 NUP210Q8TEM1 1887 aaPredicted RBP7.31□□□□□ -1.24
SMC4-217ENST00000485867 DEPDC1BQ8WUY9 529 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 MSANTD3Q96H12 275 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 ZC3H10Q96K80 434 aaKnown RBP7.31□□□□□ -1.24
SMC4-217ENST00000485867 SH2D3AQ9BRG2 576 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 CACNG4Q9UBN1 327 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 HES2Q9Y543 173 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 SPTA1P02549 2419 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 KIAA1549LQ6ZVL6 1849 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 PLXNB3Q9ULL4 1909 aa7.31□□□□□ -1.24
SMC4-217ENST00000485867 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TNRC6BQ9UPQ9 1833 aaKnown RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 UNC79Q9P2D8 2635 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 CCDC163A0A0D9SF12 145 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 WDR27A2RRH5 827 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 FAM221AA4D161 298 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 UPK3BL1B0FP48 263 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 UPK3BL2E5RIL1 263 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 EXTL3O43909 919 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TADA2AO75478 443 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 HPXP02790 462 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PLCG1P19174 1290 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TPP2P29144 1249 aaPredicted RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 SOX9P48436 509 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PXNP49023 591 aaPredicted RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 HK2P52789 917 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 GRIK3Q13003 919 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PSMD2Q13200 908 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 RAB33AQ14088 237 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 HSP90AA2PQ14568 343 aaPredicted RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 PLK5Q496M5 336 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PRR16Q569H4 304 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 XKR3Q5GH77 459 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 DGKKQ5KSL6 1271 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 JAKMIP3Q5VZ66 844 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 C1orf228Q6PIY5 440 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 DNAJC14Q6Y2X3 702 aaPredicted RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 BNC2Q6ZN30 1099 aaPredicted RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 RTL10Q7L3V2 364 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 SRGAP1Q7Z6B7 1085 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 RAB11FIP4Q86YS3 637 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 DEFB124Q8NES8 71 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 HASPINQ8TF76 798 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 LENG9Q96B70 501 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TCEAL4Q96EI5 215 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PAAF1Q9BRP4 392 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 APOL6Q9BWW8 343 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 LNPKQ9C0E8 428 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
SMC4-217ENST00000485867 TMEM9BQ9NQ34 198 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 GIT1Q9Y2X7 761 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 COL4A3BPQ9Y5P4 624 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms