RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SIK3Q9Y2K2 1263 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 NUMBLQ9Y6R0 609 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 NUP210Q8TEM1 1887 aaPredicted RBP12.51□□□□□ -0.41
HPS4-214ENST00000485842 ANAPC1Q9H1A4 1944 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
HPS4-214ENST00000485842 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 EPHB6O15197 1021 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 CYP26A1O43174 497 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 ABL1P00519 1130 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 ZNF445P59923 1031 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 FANCCQ00597 558 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 PDE4CQ08493 712 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 HTR4Q13639 388 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 STILQ15468 1287 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 FAM78AQ5JUQ0 283 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 TXNDC8Q6A555 127 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 PARM1Q6UWI2 310 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 MTSS1LQ765P7 747 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 MAB21L3Q8N8X9 362 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 FGF14Q92915 247 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
HPS4-214ENST00000485842 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 TRPM5Q9NZQ8 1165 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 GMIPQ9P107 970 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
HPS4-214ENST00000485842 NCOR1O75376 2440 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 A0A1B0GTH6 734 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 F8VZ95 297 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 TNFRSF10AO00220 468 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 TULP2O00295 520 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 MED7O43513 233 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 RGS7P49802 495 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 PTK2Q05397 1052 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 CNGA2Q16280 664 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 PIGZQ86VD9 579 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 SMARCD2Q92925 531 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 KHSRPQ92945 711 aaKnown RBP eCLIP12.5□□□□□ -0.41
HPS4-214ENST00000485842 SECISBP2LQ93073 1101 aaKnown RBP12.5□□□□□ -0.41
HPS4-214ENST00000485842 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
HPS4-214ENST00000485842 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 STK33Q9BYT3 514 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 SMG9Q9H0W8 520 aaKnown RBP12.5□□□□□ -0.41
HPS4-214ENST00000485842 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
HPS4-214ENST00000485842 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 ANHXE9PGG2 379 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 DPYSL4O14531 572 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
HPS4-214ENST00000485842 GFPT2O94808 682 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 CKMP06732 381 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 FCARP24071 287 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 DDX6P26196 483 aaKnown RBP eCLIP12.49□□□□□ -0.41
HPS4-214ENST00000485842 AVPR1AP37288 418 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 VIPR2P41587 438 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 TKTL1P51854 596 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 UBASH3AP57075 661 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 DENND1BQ6P3S1 775 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 TTC16Q8NEE8 873 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 ZNF606Q8WXB4 792 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 RPP25Q9BUL9 199 aaKnown RBP12.49□□□□□ -0.41
HPS4-214ENST00000485842 SMOC2Q9H3U7 446 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 LRRC4Q9HBW1 653 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 ZFP14Q9HCL3 533 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 COMMD8Q9NX08 183 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 CHORDC1Q9UHD1 332 aaPredicted RBP12.49□□□□□ -0.41
HPS4-214ENST00000485842 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
HPS4-214ENST00000485842 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
HPS4-214ENST00000485842 TRAV19A0A0A6YYK7 116 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 ZNF840PA6NDX5 716 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PIK3R2O00459 728 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 DLL1O00548 723 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 DCXO43602 365 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 NARSO43776 548 aaKnown RBP12.48□□□□□ -0.41
HPS4-214ENST00000485842 CFHP08603 1231 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 LCP1P13796 627 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 CLCN1P35523 988 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PPP3CCP48454 512 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 PDE6CP51160 858 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 KIF11P52732 1056 aa12.48□□□□□ -0.41
HPS4-214ENST00000485842 BPIFB4P59827 614 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms