RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 GPR152Q8TDT2 470 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 GIPC2Q8TF65 315 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 LRRC4Q9HBW1 653 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 SLC38A8A6NNN8 435 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 GABRB2P47870 512 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 SLC5A3P53794 718 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 EPHB3P54753 998 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 SNX16P57768 344 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 RBM10P98175 930 aaKnown RBP18.52■□□□□ 0.56
CHMP3-207ENST00000485465 PTP4A2Q12974 167 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 SPA17Q15506 151 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 MMS22LQ6ZRQ5 1243 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 Q7L0L9 218 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 MON1BQ7L1V2 547 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 DNAAF5Q86Y56 855 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 MCOLN2Q8IZK6 566 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 EFHBQ8N7U6 833 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.56
CHMP3-207ENST00000485465 E5RJQ4 531 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 PIK3R2O00459 728 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 LRG1P02750 347 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 ERBB2P04626 1255 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 LCP1P13796 627 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 HOXA9P31269 272 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 TKTL1P51854 596 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
CHMP3-207ENST00000485465 ADIGQ0VDE8 80 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 VEPH1Q14D04 833 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 C10orf76Q5T2E6 689 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 TMEM184AQ6ZMB5 413 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 DENND5BQ6ZUT9 1274 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 STKLD1Q8NE28 680 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 SCAMP5Q8TAC9 235 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 IPO4Q8TEX9 1081 aaKnown RBP18.51■□□□□ 0.55
CHMP3-207ENST00000485465 CASP10Q92851 521 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 C18orf8Q96DM3 657 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 VCPIP1Q96JH7 1222 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 C11orf70Q9BRQ4 267 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 MIS12Q9H081 205 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 COMMD8Q9NX08 183 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 IL37Q9NZH6 218 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 TJP2Q9UDY2 1190 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 ASB3Q9Y575 518 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 USP3Q9Y6I4 520 aa18.51■□□□□ 0.55
CHMP3-207ENST00000485465 RFPL2O75678 378 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 RTN3O95197 1032 aaPredicted RBP18.5■□□□□ 0.55
CHMP3-207ENST00000485465 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
CHMP3-207ENST00000485465 CALB1P05937 261 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 HNRNPA1P09651 372 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHMP3-207ENST00000485465 CSH1P0DML2 217 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 CSH2P0DML3 217 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 MAGEA1P43355 309 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 MTMR3Q13615 1198 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 C2CD6Q53TS8 623 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 CYP4A22Q5TCH4 519 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 TOGARAM2Q6ZUX3 1019 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 ITIH5Q86UX2 942 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 SCUBE3Q8IX30 993 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 SIX6OS1Q8N1H7 587 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 CDX2Q99626 313 aaPredicted RBP18.5■□□□□ 0.55
CHMP3-207ENST00000485465 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 ZDHHC7Q9NXF8 308 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 PCDHA13Q9Y5I0 950 aa18.5■□□□□ 0.55
CHMP3-207ENST00000485465 SPDYE4A6NLX3 237 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 CCL16O15467 120 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 LINC01565O15544 149 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 PAPSS1O43252 624 aaPredicted RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 FBXO21O94952 628 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 GLP2RO95838 553 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 H2AFZP0C0S5 128 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 HMGA1P17096 107 aaKnown RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 GALCP54803 685 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 USP46P62068 366 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 KRT83P78385 493 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ADAM15Q13444 863 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ZNF268Q14587 947 aaPredicted RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 PM20D1Q6GTS8 502 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 H2AFVQ71UI9 128 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 DNAJB7Q7Z6W7 309 aaPredicted RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 XYLT1Q86Y38 959 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ELMOD1Q8N336 334 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 DEFB123Q8N688 67 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ACRBPQ8NEB7 543 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 MYLIPQ8WY64 445 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 PSMG2Q969U7 264 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ZNF512Q96ME7 567 aaPredicted RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 TTLL2Q9BWV7 592 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 PACSIN1Q9BY11 444 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 ULBP1Q9BZM6 244 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 FBXO44Q9H4M3 255 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 CNGB3Q9NQW8 809 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 EHD2Q9NZN4 543 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 STRIP2Q9ULQ0 834 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 REXO2Q9Y3B8 237 aaKnown RBP18.49■□□□□ 0.55
CHMP3-207ENST00000485465 MYO7AQ13402 2215 aa18.49■□□□□ 0.55
CHMP3-207ENST00000485465 CCDC195A0A1B0GUA6 201 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 FAM92AA1XBS5 289 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms