RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	FUBP1	Q96AE4	644 aa	Known RBP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	SARAF	Q96BY9	339 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	DPH1	Q9BZG8	443 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	MYLK2	Q9H1R3	596 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	LDAH	Q9H6V9	325 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	BRD9	Q9H8M2	597 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	TM7SF3	Q9NS93	570 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	SACM1L	Q9NTJ5	587 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	FAM30A	Q9NZY2	134 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	JKAMP	Q9P055	326 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	LUZP4	Q9P127	313 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	FNIP2	Q9P278	1114 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ACTL7A	Q9Y615	435 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	USP19	O94966	1318 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	GRIN2B	Q13224	1484 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	NOTCH4	Q99466	2003 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	CUX1	P39880	1505 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ADCY10	Q96PN6	1610 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024		A0A087WV62	115 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024		A0A1W2PPC4	97 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	TRIM43B	A6NCK2	446 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	GOLGA6L3	A6NEY3	463 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	BTN3A1	O00481	513 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	GRM6	O15303	877 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	WDHD1	O75717	1129 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	CHEK2	O96017	543 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	PRKCG	P05129	697 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	ANXA2	P07355	339 aa	Known RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	PRR35	P0CG20	571 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	RARB	P10826	455 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	PCSK1	P29120	753 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	SATB1	Q01826	763 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	SLC13A2	Q13183	592 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	KIF22	Q14807	665 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	CCDC38	Q502W7	563 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	ALF	Q53S48	1182 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	AFMID	Q63HM1	303 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	CCDC70	Q6NSX1	233 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	RFX8	Q6ZV50	586 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	SESTD1	Q86VW0	696 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	RNF169	Q8NCN4	708 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	RPL36AL	Q969Q0	106 aa	Known RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	ZNF566	Q969W8	418 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	MOGAT1	Q96PD6	335 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	PAGR1	Q9BTK6	254 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	MRI1	Q9BV20	369 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	A1CF	Q9NQ94	594 aa	Known RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	FLRT1	Q9NZU1	646 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	CPNE7	Q9UBL6	633 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	PLEKHM1	Q9Y4G2	1056 aa		4.61	□□□□□ -1.67
VPS8-223	ENST00000485024	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	MBD3L3	A6NE82	208 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	AREL1	O15033	823 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	NCK2	O43639	380 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	TLR5	O60602	858 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	SLC43A1	O75387	559 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	MOSPD3	O75425	235 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	HAUS5	O94927	633 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	POMC	P01189	267 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	EEF1G	P26641	437 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CHKA	P35790	457 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ALDH1A3	P47895	512 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CLRN1	P58418	232 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	TUBA4A	P68366	448 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	NOMO3	P69849	1222 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	PUM3	Q15397	648 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ELF2	Q15723	593 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CATSPERG	Q6ZRH7	1159 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	USP43	Q70EL4	1123 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	RNF44	Q7L0R7	432 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ANKRD18A	Q8IVF6	992 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	YAF2	Q8IY57	180 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	TXLNB	Q8N3L3	684 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	DNAJC5G	Q8N7S2	189 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	RNF152	Q8N8N0	203 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CCDC150	Q8NCX0	1101 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	REPS2	Q8NFH8	660 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ZFP28	Q8NHY6	868 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	STON2	Q8WXE9	905 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	KIAA1191	Q96A73	305 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	TTLL2	Q9BWV7	592 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	MAF1	Q9H063	256 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CASS4	Q9NQ75	786 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ZSCAN32	Q9NX65	697 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	COL20A1	Q9P218	1284 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	MYO1A	Q9UBC5	1043 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ZNF69	Q9UC07	566 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	RUVBL1	Q9Y265	456 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	DGKB	Q9Y6T7	804 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	ATRNL1	Q5VV63	1379 aa		4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	TARBP1	Q13395	1621 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-223	ENST00000485024	CLCA1	A8K7I4	914 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	KIAA0391	O15091	583 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms