RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 BPIFB1Q8TDL5 484 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 NUP210Q8TEM1 1887 aaPredicted RBP17.17■□□□□ 0.34
DDR1-246ENST00000485023 E2F7Q96AV8 911 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 CSNK1G1Q9HCP0 422 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 ANO10Q9NW15 660 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 GMIPQ9P107 970 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 ZNF840PA6NDX5 716 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 USP17L7P0C7H9 530 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 HDCP19113 662 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 SLC9A1P19634 815 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 ACO1P21399 889 aaKnown RBP17.16■□□□□ 0.34
DDR1-246ENST00000485023 CD72P21854 359 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 RBBP8NLQ8NC74 664 aaPredicted RBP17.16■□□□□ 0.34
DDR1-246ENST00000485023 IRF7Q92985 503 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 KREMEN1Q96MU8 473 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 DUSP16Q9BY84 665 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 FOXQ1Q9C009 403 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 UBE2TQ9NPD8 197 aaPredicted RBP17.16■□□□□ 0.34
DDR1-246ENST00000485023 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 SMPD4Q9NXE4 827 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 TAB2Q9NYJ8 693 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
DDR1-246ENST00000485023 ZMYM5Q9UJ78 669 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 HCN4Q9Y3Q4 1203 aa17.16■□□□□ 0.34
DDR1-246ENST00000485023 GREB1Q4ZG55 1949 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 RNF225M0QZC1 329 aaPredicted RBP17.15■□□□□ 0.34
DDR1-246ENST00000485023 CYP26A1O43174 497 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 PI15O43692 258 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 KRT5P13647 590 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 TNK2Q07912 1038 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 VWA3BQ502W6 1294 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 ARHGAP17Q68EM7 881 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 ASTLQ6HA08 431 aaPredicted RBP17.15■□□□□ 0.34
DDR1-246ENST00000485023 TRIM65Q6PJ69 517 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 TTC30AQ86WT1 665 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 CSGALNACT1Q8TDX6 532 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 DNASE1L2Q92874 299 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 TUBGCP2Q9BSJ2 902 aa17.15■□□□□ 0.34
DDR1-246ENST00000485023 SCAMP3O14828 347 aaKnown RBP17.14■□□□□ 0.33
DDR1-246ENST00000485023 CHADO15335 359 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 BRD2P25440 801 aaKnown RBP17.14■□□□□ 0.33
DDR1-246ENST00000485023 WEE1P30291 646 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 AVPR2P30518 371 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 SOX9P48436 509 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 PGFP49763 221 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 GCNT1Q02742 428 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 TYRO3Q06418 890 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 UBXN2BQ14CS0 331 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 ARHGAP44Q17R89 818 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 EXOC3L4Q17RC7 722 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 TCP11X2Q5H9J9 407 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
DDR1-246ENST00000485023 MIIPQ5JXC2 388 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 TRIM68Q6AZZ1 485 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 UBA3Q8TBC4 463 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 ENOX1Q8TC92 643 aaKnown RBP17.14■□□□□ 0.33
DDR1-246ENST00000485023 SH3RF2Q8TEC5 729 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 TFAP2BQ92481 460 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 SHDQ96IW2 340 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 FAM124BQ9H5Z6 455 aaPredicted RBP17.14■□□□□ 0.33
DDR1-246ENST00000485023 CCSER2Q9H7U1 834 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 KIF9Q9HAQ2 790 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 OBP2AQ9NY56 170 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 PIAS3Q9Y6X2 628 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 PATJQ8NI35 1801 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 KMT2EQ8IZD2 1858 aa17.14■□□□□ 0.33
DDR1-246ENST00000485023 TICRRQ7Z2Z1 1910 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 COL4A2P08572 1712 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 TULP2O00295 520 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 ARNTLO00327 626 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 MBL2P11226 248 aaPredicted RBP17.13■□□□□ 0.33
DDR1-246ENST00000485023 VDRP11473 427 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 AOC1P19801 751 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 PPP3CCP48454 512 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 KPNA1P52294 538 aaPredicted RBP17.13■□□□□ 0.33
DDR1-246ENST00000485023 PDE4CQ08493 712 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 MTF1Q14872 753 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 ZNF77Q15935 545 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 CC2D1AQ6P1N0 951 aaPredicted RBP17.13■□□□□ 0.33
DDR1-246ENST00000485023 PIGZQ86VD9 579 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 RNF38Q9H0F5 515 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 FBXO44Q9H4M3 255 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 FANCLQ9NW38 375 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 THG1LQ9NWX6 298 aaKnown RBP17.13■□□□□ 0.33
DDR1-246ENST00000485023 IL37Q9NZH6 218 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 HESX1Q9UBX0 185 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 APEX2Q9UBZ4 518 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 AJAP1Q9UKB5 411 aaPredicted RBP17.13■□□□□ 0.33
DDR1-246ENST00000485023 CPQQ9Y646 472 aa17.13■□□□□ 0.33
DDR1-246ENST00000485023 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 DENND4CQ5VZ89 1909 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms