RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ARHGEF33A8MVX0 844 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SFNP31947 248 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 CCT8P50990 548 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 NME3Q13232 169 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 OTOAQ7RTW8 1153 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 FRMD5Q7Z6J6 570 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ARPINQ7Z6K5 226 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PIK3C3Q8NEB9 887 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 APOL3O95236 402 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 APOA4P06727 396 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PACS1Q6VY07 963 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SLC30A5Q8TAD4 765 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 RAD54LQ92698 747 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 RGS17Q9UGC6 210 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TUBGCP4Q9UGJ1 667 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ABCG2Q9UNQ0 655 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 UMODL1Q5DID0 1318 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 AP5Z1O43299 807 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 CCNT2O60583 730 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 NPR2P20594 1047 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 KLRC1P26715 233 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 FNTAP49354 379 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TPTEP56180 551 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SPIRE1Q08AE8 756 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 NDUFAF6Q330K2 333 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 GALNT18Q6P9A2 607 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 FAM213AQ9BRX8 229 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ASAP1Q9ULH1 1129 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 POGZQ7Z3K3 1410 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PDS5AQ29RF7 1337 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 LDLRP01130 860 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 IFNA16P05015 189 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PABPC1P11940 636 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TIMM50Q3ZCQ8 353 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ANKRD49Q8WVL7 239 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ZHX1-C8orf76Q96EF9 292 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ERAP1Q9NZ08 941 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SUPT3HB4E1H0 165 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PDLIM1O00151 329 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 XPAP23025 273 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ME2P23368 584 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SLC1A6P48664 564 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SEPHS1P49903 392 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 CENPCQ03188 943 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 C2CD6Q53TS8 623 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ZNF544Q6NX49 715 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ACTRT1Q8TDG2 376 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 AFF2P51816 1311 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SAGE2PA6NJ88 616 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 H7C0S8 307 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RIPK2O43353 540 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DBTP11182 482 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 COMTP21964 271 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 STXBP2Q15833 593 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 POLNQ7Z5Q5 900 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF75CPQ92670 426 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 NAALADL1Q9UQQ1 740 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 SNX3O60493 162 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 PDE8AO60658 829 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 TMCC2O75069 709 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CAMTA2O94983 1202 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 UPP2O95045 317 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FAM228BP0C875 321 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 NAMPTP43490 491 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 MINDY2Q8NBR6 621 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DNAJC1Q96KC8 554 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FAM129BQ96TA1 746 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 COMMD9Q9P000 198 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 BARX2Q9UMQ3 279 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 VPS4AQ9UN37 437 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 IQGAP2Q13576 1575 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RAB43Q86YS6 212 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DNAJC7Q99615 494 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 OSBPL11Q9BXB4 747 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 VPS33BQ9H267 617 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 MAPRE3Q9UPY8 281 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DGKBQ9Y6T7 804 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CYP2D6P10635 497 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RRM2P31350 389 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 KIZQ2M2Z5 673 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ERMARDQ5T6L9 678 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CYP2R1Q6VVX0 501 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 C1orf131Q8NDD1 294 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 PTPRN2Q92932 1015 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 TSEN34Q9BSV6 310 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CAPN6Q9Y6Q1 641 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ASS1P00966 412 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ADSSP30520 456 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms