RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PTPN9P43378 593 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 FAAP100Q0VG06 881 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 NNTQ13423 1086 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 CASP8Q14790 479 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 CCNG2Q16589 344 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 DUPD1Q68J44 220 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 CCDC137Q6PK04 289 aaKnown RBP14.74□□□□□ -0.05
CLK3-204ENST00000483723 SPOCD1Q6ZMY3 1216 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 CLEC20AQ6ZU45 233 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 CENPIQ92674 756 aaPredicted RBP14.74□□□□□ -0.05
CLK3-204ENST00000483723 ERP44Q9BS26 406 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 DCLK3Q9C098 648 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 RAB17Q9H0T7 212 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 PLEKHA4Q9H4M7 779 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 TBC1D13Q9NVG8 400 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 PCDHB8Q9UN66 801 aa14.74□□□□□ -0.05
CLK3-204ENST00000483723 TTC3P53804 2025 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 ESYT3A0FGR9 886 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 I3L4J1 428 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 KRT1P04264 644 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 ITGB1P05556 798 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 FAM200BP0CF97 657 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 IBSPP21815 317 aaPredicted RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 ECHS1P30084 290 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 SLC8A3P57103 927 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 EFHC1Q5JVL4 640 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 CYP4V2Q6ZWL3 525 aaPredicted RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 JAMLQ86YT9 394 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 CCDC50Q8IVM0 306 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 GSPT2Q8IYD1 628 aaKnown RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 PCED1BQ96HM7 432 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 ZNF333Q96JL9 665 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 SMOQ99835 787 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 VIPAS39Q9H9C1 493 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 CSNK1G1Q9HCP0 422 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 FAM114A2Q9NRY5 505 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 OGFRQ9NZT2 677 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 USP18Q9UMW8 372 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 UTP11Q9Y3A2 253 aaKnown RBP14.73□□□□□ -0.05
CLK3-204ENST00000483723 SCN5AQ14524 2016 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 TET1Q8NFU7 2136 aa14.73□□□□□ -0.05
CLK3-204ENST00000483723 hCG_1818297A0A087WSY0 165 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 PI4K2BG5E9Z4 385 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 GRAP2O75791 330 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 LCP1P13796 627 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 KDELR1P24390 212 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 GJC1P36383 396 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 ARSEP51690 589 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 LLGL1Q15334 1064 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 C15orf59Q2T9L4 293 aaPredicted RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 PAN2Q504Q3 1202 aaKnown RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 TFDP3Q5H9I0 405 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 INTS6LQ5JSJ4 861 aaKnown RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 SH3PXD2AQ5TCZ1 1133 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 DRICH1Q6PGQ1 229 aaPredicted RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 FAM35AQ86V20 835 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 ZMIZ2Q8NF64 920 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 CLEC4CQ8WTT0 213 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 C1orf54Q8WWF1 131 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 CASD1Q96PB1 797 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 HEMGNQ9BXL5 484 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 CHST7Q9NS84 486 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 PCDHB7Q9Y5E2 793 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 DCDC2CA8MYV0 355 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 HHLA1C9JL84 531 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 RRP9O43818 475 aaKnown RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 TJP3O95049 919 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 SDC4P31431 198 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 TLE2Q04725 743 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 ADCY2Q08462 1091 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 SMC1AQ14683 1233 aaKnown RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 BOLA3Q53S33 107 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 RAB41Q5JT25 222 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 THEM5Q8N1Q8 247 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 IFT81Q8WYA0 676 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 ARMC5Q96C12 935 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 PEBP4Q96S96 227 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 TRIM51Q9BSJ1 452 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 HIPK3Q9H422 1215 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 KLHL11Q9NVR0 708 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 FEZ2Q9UHY8 353 aaPredicted RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 RASAL2Q9UJF2 1139 aa14.72□□□□□ -0.05
CLK3-204ENST00000483723 R3HDM2Q9Y2K5 976 aaKnown RBP14.72□□□□□ -0.05
CLK3-204ENST00000483723 NLRC5Q86WI3 1866 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 F8W810 466 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 DAPK3O43293 454 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 OAZ2O95190 189 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 KRT10P13645 584 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 KCNJ1P48048 391 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
CLK3-204ENST00000483723 MRPS5P82675 430 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms