RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 BARX2Q9UMQ3 279 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 WDR37Q9Y2I8 494 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CYB561D2O14569 222 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CASQ2O14958 399 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 DENRO43583 198 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 TRMUO75648 421 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CD48P09326 243 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 HOXA13P31271 388 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 ZNF76P36508 570 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SREBF1P36956 1147 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 PHEXP78562 749 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 GABPAQ06546 454 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 USH1GQ495M9 461 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 TBC1D10BQ4KMP7 808 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 TCHHL1Q5QJ38 904 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 DENND5BQ6ZUT9 1274 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 IGDCC3Q8IVU1 814 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CPT1BQ92523 772 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 E2F7Q96AV8 911 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 DCUN1D1Q96GG9 259 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 FAM84AQ96KN4 292 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 MRPL1Q9BYD6 325 aaKnown RBP12.31□□□□□ -0.44
VTI1A-205ENST00000483122 TUFT1Q9NNX1 390 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
VTI1A-205ENST00000483122 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 FAM155BO75949 473 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 SERPINA6P08185 405 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 CFHP08603 1231 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 ALDH1A3P47895 512 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 LPIN1Q14693 890 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 OGFRL1Q5TC84 451 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PGM2L1Q6PCE3 622 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 DRICH1Q6PGQ1 229 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 TAS1R2Q8TE23 839 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 MAML3Q96JK9 1138 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 CNBD2Q96M20 576 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 RMI1Q9H9A7 625 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PCDH9Q9HC56 1237 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 DRG1Q9Y295 367 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 SDR42E2A6NKP2 422 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 COPEO14579 308 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PEX1O43933 1283 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 KRT1P04264 644 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 CYP3A4P08684 503 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 GDF10P55107 478 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 ACAP1Q15027 740 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 MON1BQ7L1V2 547 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 ZNF410Q86VK4 478 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 HPS6Q86YV9 775 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 CBWD2Q8IUF1 395 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 ZFRQ96KR1 1074 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PI4K2AQ9BTU6 479 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 LIN28AQ9H9Z2 209 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 PFDN4Q9NQP4 134 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 POMPQ9Y244 141 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 HBS1LQ9Y450 684 aaKnown RBP12.3□□□□□ -0.44
VTI1A-205ENST00000483122 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
VTI1A-205ENST00000483122 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 RBM47A0AV96 593 aaKnown RBP12.29□□□□□ -0.44
VTI1A-205ENST00000483122 E9PBE3 544 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 DKC1O60832 514 aaKnown RBP eCLIP12.29□□□□□ -0.44
VTI1A-205ENST00000483122 TMEM63AO94886 807 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 CRTAMO95727 393 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 PROCP04070 461 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 AOC1P19801 751 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 DSG3P32926 999 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 CIITAP33076 1130 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 MLH1P40692 756 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 NSFP46459 744 aaKnown RBP12.29□□□□□ -0.44
VTI1A-205ENST00000483122 CD151P48509 253 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 PEX6Q13608 980 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 KRT81Q14533 505 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 TBCCQ15814 346 aa12.29□□□□□ -0.44
VTI1A-205ENST00000483122 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms