RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 CASP4P49662 377 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 NDUFA8P51970 172 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 CLDN10P78369 228 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 TNK2Q07912 1038 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 RUNX3Q13761 415 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 DENND5BQ6ZUT9 1274 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 SYNPOQ8N3V7 929 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 ZBTB44Q8NCP5 570 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 NELL1Q92832 810 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 FAM83CQ9BQN1 747 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 TRPC7Q9HCX4 862 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 GKN1Q9NS71 199 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 CCL26Q9Y258 94 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
COL21A1-209ENST00000482933 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
COL21A1-209ENST00000482933 P4HA1P13674 534 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PFKLP17858 780 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
COL21A1-209ENST00000482933 CXCL12P48061 93 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PPP3CCP48454 512 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 NCOA4Q13772 614 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PON2Q15165 354 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PDGFRLQ15198 375 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF699Q32M78 642 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 TDRD10Q5VZ19 366 aaKnown RBP13.63□□□□□ -0.23
COL21A1-209ENST00000482933 CEP135Q66GS9 1140 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 KRBA2Q6ZNG9 492 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 SPEM1Q8N4L4 309 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 C8orf48Q96LL4 319 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 XYLT2Q9H1B5 865 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 TRPM5Q9NZQ8 1165 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 TRAF3IP3Q9Y228 551 aa13.63□□□□□ -0.23
COL21A1-209ENST00000482933 IKBKBO14920 756 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 MAPK13O15264 365 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 LILRB5O75023 590 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 CKMP06732 381 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 NOP14P78316 857 aaKnown RBP13.62□□□□□ -0.23
COL21A1-209ENST00000482933 KCNB1Q14721 858 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 MTF1Q14872 753 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 NFIL3Q16649 462 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 CYP4X1Q8N118 509 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 B3GALNT2Q8NCR0 500 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 RUBCNQ92622 972 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 TTLL2Q9BWV7 592 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 EBF3Q9H4W6 596 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 TOR4AQ9NXH8 423 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 NME7Q9Y5B8 376 aa13.62□□□□□ -0.23
COL21A1-209ENST00000482933 KIF26AQ9ULI4 1882 aaPredicted RBP13.62□□□□□ -0.23
COL21A1-209ENST00000482933 PTPRDP23468 1912 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 GREB1Q4ZG55 1949 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 ATP8B3O60423 1300 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
COL21A1-209ENST00000482933 F8VP50 259 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF202O95125 648 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 HDCP19113 662 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 DPYDQ12882 1025 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 CCINQ13939 588 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 GAS6Q14393 721 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF77Q15935 545 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 TRIM68Q6AZZ1 485 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 ARL14EPQ8N8R7 260 aaPredicted RBP13.61□□□□□ -0.23
COL21A1-209ENST00000482933 SUMF1Q8NBK3 374 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 OSCP1Q8WVF1 389 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 TAF4BQ92750 862 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 SECISBP2LQ93073 1101 aaKnown RBP13.61□□□□□ -0.23
COL21A1-209ENST00000482933 TNIP3Q96KP6 325 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 CYP2S1Q96SQ9 504 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 DPEP3Q9H4B8 488 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 RBM12Q9NTZ6 932 aaKnown RBP13.61□□□□□ -0.23
COL21A1-209ENST00000482933 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
COL21A1-209ENST00000482933 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 ANAPC1Q9H1A4 1944 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 PAPSS2O95340 614 aaPredicted RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 TDGF1P13385 188 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 TCF3P15923 654 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 IFNAR2P48551 515 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 CDH8P55286 799 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 DLG4P78352 724 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 SATB1Q01826 763 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 USP4Q13107 963 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 ZACNQ401N2 412 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 INTS8Q75QN2 995 aaKnown RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms