RNA–Protein interactions for RNA: ENST00000482755.6

CTTN-206, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-206ENST00000482755 TDRD10Q5VZ19 366 aaKnown RBP20.81■□□□□ 0.92
CTTN-206ENST00000482755 FILIP1Q7Z7B0 1213 aa20.81■□□□□ 0.92
CTTN-206ENST00000482755 B3GALNT2Q8NCR0 500 aa20.81■□□□□ 0.92
CTTN-206ENST00000482755 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
CTTN-206ENST00000482755 SLC39A2Q9NP94 309 aa20.81■□□□□ 0.92
CTTN-206ENST00000482755 SMPD4Q9NXE4 827 aa20.81■□□□□ 0.92
CTTN-206ENST00000482755 CGNQ9P2M7 1197 aaKnown RBP20.81■□□□□ 0.92
CTTN-206ENST00000482755 NXF1Q9UBU9 619 aaKnown RBP20.81■□□□□ 0.92
CTTN-206ENST00000482755 SDK1Q7Z5N4 2213 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 PVALEFA0A1B0GWK0 134 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 ABL1P00519 1130 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 ATICP31939 592 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 CASP4P49662 377 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 SEC13P55735 322 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 CUL4BQ13620 913 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 ELF2Q15723 593 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 KNOP1Q1ED39 458 aaKnown RBP20.8■□□□□ 0.92
CTTN-206ENST00000482755 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
CTTN-206ENST00000482755 C2orf27AQ580R0 203 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 STPG1Q5TH74 334 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
CTTN-206ENST00000482755 PLEKHO2Q8TD55 490 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 SYAP1Q96A49 352 aaPredicted RBP20.8■□□□□ 0.92
CTTN-206ENST00000482755 SLITRK1Q96PX8 696 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 VPS45Q9NRW7 570 aa20.8■□□□□ 0.92
CTTN-206ENST00000482755 SCAMP3O14828 347 aaKnown RBP20.79■□□□□ 0.92
CTTN-206ENST00000482755 RHOBTB1O94844 696 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 DGKEP52429 567 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 DHCR24Q15392 516 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 NUP93Q8N1F7 819 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 TSTD1Q8NFU3 115 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 SMYD3Q9H7B4 428 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 VRTNQ9H8Y1 702 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 CFAP97Q9P2B7 532 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 PCDHA7Q9UN72 937 aa20.79■□□□□ 0.92
CTTN-206ENST00000482755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.78■□□□□ 0.92
CTTN-206ENST00000482755 SLC9A3R1O14745 358 aaPredicted RBP20.78■□□□□ 0.92
CTTN-206ENST00000482755 EXOC3O60645 756 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 YWHAQP27348 245 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 AFMP43652 599 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 CDH8P55286 799 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 MESP2Q0VG99 397 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 IFRD2Q12894 506 aaPredicted RBP20.78■□□□□ 0.92
CTTN-206ENST00000482755 RESP18Q5W5W9 173 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 TCEAL6Q6IPX3 200 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 RHBDF2Q6PJF5 856 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 RASSF3Q86WH2 238 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 SFTPA1Q8IWL2 248 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 TCEAL3Q969E4 200 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 KCNK16Q96T55 309 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 MMP17Q9ULZ9 603 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 INVSQ9Y283 1065 aa20.78■□□□□ 0.92
CTTN-206ENST00000482755 ZFHX4Q86UP3 3567 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 BCLAF3A2AJT9 711 aaKnown RBP20.77■□□□□ 0.92
CTTN-206ENST00000482755 PHACTR2O75167 634 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 ZSCAN22P10073 491 aaPredicted RBP20.77■□□□□ 0.92
CTTN-206ENST00000482755 CHRM1P11229 460 aaPredicted RBP20.77■□□□□ 0.92
CTTN-206ENST00000482755 KCNA4P22459 653 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 SLC6A11P48066 632 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 ME1P48163 572 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 CLDN10P78369 228 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 CREB5Q02930 508 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 CRY1Q16526 586 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 USP39Q53GS9 565 aaKnown RBP20.77■□□□□ 0.92
CTTN-206ENST00000482755 ANO7Q6IWH7 933 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 PAQR9Q6ZVX9 377 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 GRAMD1CQ8IYS0 662 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 CCDC33Q8N5R6 958 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 PARD3BQ8TEW8 1205 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 OVCA2Q8WZ82 227 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 SNX21Q969T3 373 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 TPSD1Q9BZJ3 242 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 FAM13BQ9NYF5 915 aa20.77■□□□□ 0.92
CTTN-206ENST00000482755 ZNF638Q14966 1978 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 LRRIQ3A6PVS8 624 aaPredicted RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 TNFRSF10BO14763 440 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 COCHO43405 550 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 RTN3O95197 1032 aaPredicted RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 CAVIN2O95810 425 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 C4BPAP04003 597 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 MBL2P11226 248 aaPredicted RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 GBP1P32455 592 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 EIF2DP41214 584 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 MRPS21P82921 87 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 BIRC3Q13489 604 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 NCOA4Q13772 614 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 ZNF699Q32M78 642 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 PMS2CLQ68D20 193 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 C12orf40Q86WS4 652 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 DDX42Q86XP3 938 aaKnown RBP eCLIP20.76■□□□□ 0.91
CTTN-206ENST00000482755 PDZD8Q8NEN9 1154 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 MDGA1Q8NFP4 955 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 SCAMP5Q8TAC9 235 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 GOLGA5Q8TBA6 731 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 FBXO32Q969P5 355 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 ELMO3Q96BJ8 720 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 ZFRQ96KR1 1074 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
CTTN-206ENST00000482755 PNKPQ96T60 521 aa20.76■□□□□ 0.91
CTTN-206ENST00000482755 DMAC2Q9NW81 257 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms