RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 RFPL2O75678 378 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 FBXO21O94952 628 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 SKILP12757 684 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 HMGA1P17096 107 aaKnown RBP16.17■□□□□ 0.18
CCM2-215ENST00000482714 FECHP22830 423 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 YWHAQP27348 245 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
CCM2-215ENST00000482714 PM20D1Q6GTS8 502 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 TMTC1Q8IUR5 882 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 SLC30A5Q8TAD4 765 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 SMG7Q92540 1137 aaKnown RBP16.17■□□□□ 0.18
CCM2-215ENST00000482714 ZNF707Q96C28 371 aaPredicted RBP16.17■□□□□ 0.18
CCM2-215ENST00000482714 CCDC42Q96M95 316 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 RIPOR3Q96MK2 946 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 NECTIN4Q96NY8 510 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 CNGB3Q9NQW8 809 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 ARHGAP20Q9P2F6 1191 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 NCANO14594 1321 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 PTPRDP23468 1912 aa16.17■□□□□ 0.18
CCM2-215ENST00000482714 SART1O43290 800 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 CALCAP01258 141 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 MTHFRP42898 656 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PSEN1P49768 467 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SLC5A3P53794 718 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 RBM10P98175 930 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 CENPCQ03188 943 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CCDC85BQ15834 202 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 PUS10Q3MIT2 529 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 TDRD12Q587J7 1177 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 ERICH1Q86X53 443 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 CCDC170Q8IYT3 715 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SPC24Q8NBT2 197 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PDZD8Q8NEN9 1154 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 GIPC2Q8TF65 315 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 IRGQQ8WZA9 623 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PPP1R13BQ96KQ4 1090 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SLITRK1Q96PX8 696 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 LRRC3Q9BY71 257 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 UBE2ZQ9H832 354 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 ASAH2Q9NR71 780 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CCL16O15467 120 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 TBX10O75333 385 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SOAT2O75908 522 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CFHP08603 1231 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PFKLP17858 780 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CDC25CP30307 473 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 GABRB2P47870 512 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 GPR15P49685 360 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 TKTL1P51854 596 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 NOMO3P69849 1222 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 DLX2Q07687 328 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 PDCLQ13371 301 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 SKIV2LQ15477 1246 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 CLEC16AQ2KHT3 1053 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 ASTE1Q2TB18 679 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 SNX30Q5VWJ9 437 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 ACAD10Q6JQN1 1059 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 TMC5Q6UXY8 1006 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 CCDC186Q7Z3E2 898 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 MON1AQ86VX9 555 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 ARHGAP18Q8N392 663 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 C12orf76Q8N812 135 aaPredicted RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 SMRP1Q8NCR6 262 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 C1orf131Q8NDD1 294 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 C18orf8Q96DM3 657 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PDLIM2Q96JY6 352 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 PCDHB18PQ96TA0 734 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 WDR6Q9NNW5 1121 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 WDR35Q9P2L0 1181 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 DNMT3BQ9UBC3 853 aaKnown RBP16.16■□□□□ 0.18
CCM2-215ENST00000482714 ADAMTS1Q9UHI8 967 aa16.16■□□□□ 0.18
CCM2-215ENST00000482714 DDX3XO00571 662 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCM2-215ENST00000482714 RTN2O75298 545 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 ZBED1O96006 694 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 MMP8P22894 467 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 NSFP46459 744 aaKnown RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 CDR1P51861 262 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 SLC18A3Q16572 532 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 RARS2Q5T160 578 aaKnown RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 EP400NLQ6ZTU2 488 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 PDZD4Q76G19 769 aaPredicted RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 BEND5Q7L4P6 421 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 SIX6OS1Q8N1H7 587 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 MAFAQ8NHW3 353 aaPredicted RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
CCM2-215ENST00000482714 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCM2-215ENST00000482714 ISCUQ9H1K1 167 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 DEF6Q9H4E7 631 aa16.15■□□□□ 0.18
CCM2-215ENST00000482714 NHEJ1Q9H9Q4 299 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms