RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TBATAQ96M53 351 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 NAP1L3Q99457 506 aaPredicted RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 RHOXF2Q9BQY4 288 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 NTPCRQ9BSD7 190 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 MENTQ9BUN1 341 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 MOV10L1Q9BXT6 1211 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 TEX13BQ9BXU2 312 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 KIAA1586Q9HCI6 787 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 RAVER2Q9HCJ3 691 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 HACL1Q9UJ83 578 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 APOBEC2Q9Y235 224 aaKnown RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 GIT1Q9Y2X7 761 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 POLR3KQ9Y2Y1 108 aaPredicted RBP8.24□□□□□ -1.09
SNX13-208ENST00000482558 PFASO15067 1338 aa8.24□□□□□ -1.09
SNX13-208ENST00000482558 DOCK1Q14185 1865 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 A0A087X0T9 212 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 CCDC66A2RUB6 948 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 C9IYK1 514 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 F5H423 210 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 CCDC188H7C350 402 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 GFRA2O00451 464 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 CLIC2O15247 247 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 ATE1O95260 518 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 TMEM253P0C7T8 217 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 FAM228BP0C875 321 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 SLC9A1P19634 815 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 AARSP49588 968 aaKnown RBP eCLIP8.23□□□□□ -1.09
SNX13-208ENST00000482558 VSNL1P62760 191 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 MRPS9P82933 396 aaKnown RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 APBA1Q02410 837 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 MAPK7Q13164 816 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 ITGB3BPQ13352 177 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 CASP8Q14790 479 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 PPP1R2P3Q6NXS1 205 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 CCNI2Q6ZMN8 369 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 ENOSF1Q7L5Y1 443 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 HAUS6Q7Z4H7 955 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 C12orf40Q86WS4 652 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 SCUBE1Q8IWY4 988 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 RHOT2Q8IXI1 618 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 NOA1Q8NC60 698 aaKnown RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 EXOC4Q96A65 974 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 INPP4AQ96PE3 977 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 PNKPQ96T60 521 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 SLC38A3Q99624 504 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 TLR10Q9BXR5 811 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 GLIS2Q9BZE0 524 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 SLC13A1Q9BZW2 595 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 ATXN3LQ9H3M9 355 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 ACAD9Q9H845 621 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 SIX2Q9NPC8 291 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 RNF146Q9NTX7 359 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 SUCLA2Q9P2R7 463 aaPredicted RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 HDAC6Q9UBN7 1215 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 CAPN6Q9Y6Q1 641 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 DUSP10Q9Y6W6 482 aa8.23□□□□□ -1.09
SNX13-208ENST00000482558 BRCA1P38398 1863 aaKnown RBP8.23□□□□□ -1.09
SNX13-208ENST00000482558 F8VZ95 297 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 NKRFO15226 690 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNX13-208ENST00000482558 ZC3H11AO75152 810 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNX13-208ENST00000482558 PALMO75781 387 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 PYGMP11217 842 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ICAM3P32942 547 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ASPAP45381 313 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 CASP4P49662 377 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 CYP2J2P51589 502 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 VAMP7P51809 220 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 EPHB4P54760 987 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 HADHBP55084 474 aaKnown RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 UBXN2AP68543 259 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 SPP2Q13103 211 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 KIF22Q14807 665 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ZC2HC1CQ53FD0 456 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 XKR9Q5GH70 373 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 PPM1JQ5JR12 505 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ALS2CLQ60I27 953 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 C8orf74Q6P047 294 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 MIS18BP1Q6P0N0 1132 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 CATSPERGQ6ZRH7 1159 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ZNF571Q7Z3V5 609 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 SLFN11Q7Z7L1 901 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 RASSF3Q86WH2 238 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 DAW1Q8N136 415 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 GPC2Q8N158 579 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 TAB3Q8N5C8 712 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 ACTRT1Q8TDG2 376 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 PARD3BQ8TEW8 1205 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 CAPZA3Q96KX2 299 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 IFT74Q96LB3 600 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 TAAR1Q96RJ0 339 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 UIMC1Q96RL1 719 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms